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SCNpilot_cont_500_bf_scaffold_942_16

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(18122..19102)

Top 3 Functional Annotations

Value Algorithm Source
Putative AraC family transcriptional regulator n=1 Tax=Pseudomonas putida CSV86 RepID=L1LSA3_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 222.0
  • Bit_score: 96
  • Evalue 5.60e-17
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:EKX81705.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 222.0
  • Bit_score: 96
  • Evalue 7.80e-17
AraC family transcriptional regulator; K04033 AraC family transcriptional regulator, ethanolamine operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 241.0
  • Bit_score: 95
  • Evalue 3.00e-17

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCTGGACGCACCGAACTGGTACGCCCGTAGGTACAACTCGGTGGTCGCCCGCACCCGCGAGTCCGATCCCGATGCGGAATTCCATATCCAGCAGATCGGCGCGCAGCGCCATGCATCGCGCCTGGCAACCATCGACTATGGCGATGCTTTTGTGCTCGACCTGCAGGACAAGGGCGGCATCGCAATGTCGGGTGCGATCAACGACGATGCTTTGACGGCAGTGTTCCTCTGGGGCGAAGGCACCACCTTCAACGGACAACGGAGTGAAACCCCGCGGCTGCGGATCATCGGCCCGGGAACGGAATTCAAACTGGAGATGCCGGGCAGCTATCGCCTCATGCGGATCGGCCTGCGGGGACCCACGCTCGCATCCCTGCGTGCGGCGTCCAACTCCGACGCGGGCGATCGGGGCTGGTTGATACCGGGCGTGCACGAGCAGCGCGTCGCACCGGGGGCCGAAGTGGAGCTTCAGCAGAAGCTGCTGCGGACCGTCGGCTTCGCGGAAGCCGCCGCGCGGCGTGGCTACGACCTCAGCGCCGGCCTTGCGGTGGCGGCGAGCGAGGCCGGCGCCGCGCTCGCGCAGGTTCTTGCCCGCACACACGCGCCGCCGGTCCGAAATCTCGGCTTCCACGACCGGCGCGAAATCGTCGATGCAACGCTCGCCATCCTCGAGGCAAAGCCTCAAAGTCCTGTTTCAGTCAGTGCCGTCTGCGGCATACTTGGTGTCGGCGAGCGCACCCTGGAGCGCGCCTTCCAGGAGTGCCTGGGCGTCAACCCGCGCGCCTATGAGCGGGAGCGGCGGTTGCGGGCGGCGCACGGCCTCATCCTGACGCGGGGGGATCGCCTTTCGATCACCGATATCGCCATGAGCTTTGGCTTCTGGCACCTGGGCCGCTTCGCAGGCGCCTACGCAGCGCTCTTCGGATGCCCGCCCAGCGAGATGCGGCGACGCATTTGGGGCTTGGTGGCGCAGGACTGA
PROTEIN sequence
Length: 327
MLDAPNWYARRYNSVVARTRESDPDAEFHIQQIGAQRHASRLATIDYGDAFVLDLQDKGGIAMSGAINDDALTAVFLWGEGTTFNGQRSETPRLRIIGPGTEFKLEMPGSYRLMRIGLRGPTLASLRAASNSDAGDRGWLIPGVHEQRVAPGAEVELQQKLLRTVGFAEAAARRGYDLSAGLAVAASEAGAALAQVLARTHAPPVRNLGFHDRREIVDATLAILEAKPQSPVSVSAVCGILGVGERTLERAFQECLGVNPRAYERERRLRAAHGLILTRGDRLSITDIAMSFGFWHLGRFAGAYAALFGCPPSEMRRRIWGLVAQD*