ggKbase home page

SCNpilot_cont_500_bf_scaffold_1608_8

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(12462..13256)

Top 3 Functional Annotations

Value Algorithm Source
RifR n=1 Tax=Amycolatopsis mediterranei RepID=Q7BUF9_AMYMD similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 244.0
  • Bit_score: 206
  • Evalue 3.10e-50
RifR {ECO:0000313|EMBL:AAG52991.1}; TaxID=33910 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 244.0
  • Bit_score: 206
  • Evalue 4.30e-50
rifR; oleoyl-(acyl-carrier-protein) hydrolase similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 240.0
  • Bit_score: 200
  • Evalue 9.10e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGTTGATATCGAGGGCGTTCCCGACGTCAACGGGGTCAATGGTCCGGCGCACGATATGGCGCGTCGATGGTTCCGGTGCTTTGCGCGGCAACCCGCCGCGTCACTGCGTCTCGTGTGCTTTCCGCATGCCGGAGGAGCGGCGAGCTTCTTCTTTCCATGGGCGAAGCCTTTCTCGCCCTCGGTGGAAGTGTGGGCCATCCGCTACCCCGGACGCGAAGATCGGCCGGCGGAAGAGCCACTCGCCGGGATCGAGGCCATGGCTGGCGAGATCGCGCATGCACTTACGGTCCTCGCTGATCGACCGATCGTCCTTTTCGGCCACAGCATGGGCGCTCTGGTCGCCTTCGAAACGGCGCGTCACCGTGACAGGCTCGCCGGCGGGGCGCCGGTCACCCGCCTCATCGCCTCGAGCAGCCCCGCGCCAATCAGCACCGGGCTGGCGCGCACCCGCGGGACGGACGACGCCTCGCTGCGGCGCGACCTGAGGCAGGGCGGCGGCACGTCGGACGCCGTCCTCGATCATCCAGAGTTGCTCGAGATCGTCCTCGAGACGCTGCGCGCCGACTATCGCCGCCTCAACGGCTACCGGCCTCTCCCCGGCGCAACGACGGGAGCGCCGATAACCGTCATTGGCGGCAGCGACGATCCAACGGTCGACGACGGCGATCTCGCGGCCTGGCAGGCCCACACGACCTCGACCTTCGACCGGCATATCTTTACCGGTGGCCATTTCCATCTCGCCGATACTCTGCCGGCGATCGTCGCGCTGGTCACCCGGGAACTCGCCTCCTGA
PROTEIN sequence
Length: 265
MVDIEGVPDVNGVNGPAHDMARRWFRCFARQPAASLRLVCFPHAGGAASFFFPWAKPFSPSVEVWAIRYPGREDRPAEEPLAGIEAMAGEIAHALTVLADRPIVLFGHSMGALVAFETARHRDRLAGGAPVTRLIASSSPAPISTGLARTRGTDDASLRRDLRQGGGTSDAVLDHPELLEIVLETLRADYRRLNGYRPLPGATTGAPITVIGGSDDPTVDDGDLAAWQAHTTSTFDRHIFTGGHFHLADTLPAIVALVTRELAS*