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SCNpilot_cont_500_bf_scaffold_1608_15

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 19326..20225

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 6.70e-141
  • rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 3.00e-140
Pseudouridine synthase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FK0_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 2.10e-140
  • rbh

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
TTGCTGGAAGCGGGTGCCGACGATGCCGGCCAGCGGCTCGATCAGTGGCTGGCCGCGAAGCTCGGACCCAGCATCTCGCGCAGCCGGTCGGTCGCCCTGCCCGAACCGGAGCCAGCCGAGCCCAAGGGCGAGGACATCGCGCTCGACGTGCTCTATGAAGATGACGAACTGATCGTCATCAACAAGCCCGCCGGGCTGGTCGTGCACCCCGGCGCCGGCAACTGGACCGGCACGCTGGTCAATGCGTTGATCCATCACTGCGGCGACAGCCTGTCCGGCATCGGTGGCGTCAGGCGTCCCGGCATCGTCCACCGGCTGGACAAGGAAACCAGCGGCGTGATGGTGGTGGCCAAGACCGACCGGGCCCACAAGGCGCTGTCGGAAGCCTTCGCCGATCACGGCCGGACCGGCGACCTGCAGCGCGCCTATCTGGCGCTGGTGTGGGGCATACCGCACAGGCCGTCCGGCACGGTCGACGCGCCGCTCGGGCGCGCCGCCGACCGCGTCCGTCGCGCCGTGGTTCCCGAAGGGCGCGATGACGCCCGCCATGCGATCACCCATTTCACGGTGATCGAGCGCTTCGGCGAGGGCCAGCGTGATTTCACCACCGCGAGCCTGCTCGAATGCCGGCTGGAGACGGGCCGCACGCATCAGATCAGGGTCCATATGGCGCATATCGGCCATCCCGTGATCGGCGATCCCGACTACGGCCAGGCCTTCCGCACCAAGGCGAACCGCCTTCCCCCGGCCCTGAGGTCCGAGGTGAGCACGTTCTCCCGGCAGGCCCTGCATGCATACCTCCTTGAATTCCGACATCCGGCCACCCATTTAACGATGAGGTTCGAGGCGCCGATGCCGAGGGACATGGAGGAACTCGTCGGCGGCTTTCGCAATCTCTGA
PROTEIN sequence
Length: 300
LLEAGADDAGQRLDQWLAAKLGPSISRSRSVALPEPEPAEPKGEDIALDVLYEDDELIVINKPAGLVVHPGAGNWTGTLVNALIHHCGDSLSGIGGVRRPGIVHRLDKETSGVMVVAKTDRAHKALSEAFADHGRTGDLQRAYLALVWGIPHRPSGTVDAPLGRAADRVRRAVVPEGRDDARHAITHFTVIERFGEGQRDFTTASLLECRLETGRTHQIRVHMAHIGHPVIGDPDYGQAFRTKANRLPPALRSEVSTFSRQALHAYLLEFRHPATHLTMRFEAPMPRDMEELVGGFRNL*