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SCNpilot_cont_500_bf_scaffold_1741_13

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(11597..12652)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF097F related cluster n=1 Tax=unknown RepID=UPI0003CF097F similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 326.0
  • Bit_score: 322
  • Evalue 3.90e-85
ABC transporter {ECO:0000313|EMBL:ESY78889.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 326.0
  • Bit_score: 322
  • Evalue 5.50e-85
ABC transporter binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 328.0
  • Bit_score: 317
  • Evalue 6.80e-84

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Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGATTGGTGCGGGAACGAACATATTCGGCTGTGGCGTGCTGGTGCTCGGCTTGCTGGGGCCGGGCGCGGCATTCGCCCAGGAAGTGACCATCGCGACGTCCGGCGGCGTGGTGCAGGAGGCGGGCGCCAAGTATCTCTGGAACCCGGCCGCCAAGTCGCTCGGCCTGACGGTCCGGGAGGAAACTTTCGACGACGGCTACCAGGCACTGCGCCTGCAGAAGGATGCCGGCGCCGTCACCTACGACATCGTCCAGGTGCCGACCTTCCAGGCCGAGATCGGCTTCAAGGAGGGCCTGTTCGGGCCGCTCGACTATTCAGTCATCGACGCCAGCGAATTTCCCAAGGCCGCCGCAGGCCCCGCCTGCATCGGCTTCCTCGCCTCCTCCTGGGTGCTGGCCTGGAACACCAAGGTCTACAAGGACAATCCGCCCAAGAGCTGGGCCGATTTCTGGGACGTGAAGAAATTCCCCGGACGTCGCGCTATGCACAACGATTCCGAAGCGCAGCTCGAGATGGCTTTGATGGCCGATGGCGTGGCGCCGAAGGATGTCTATTCGGTGCTGTCCTCGCCCGAAGGGTTGAAGCGCGCCATCGACAAGCTTGCCGAATTGAAGCCCAATATCGCGGTCTGGTGGTCATCCGGCTCGCAGAGCCAGCAGATCATGAAGGACAACGAGGTCGACATGGCCGTGATGTGGAACGGCCGCTCCGAAGGTCTCAAGGCCGGCGGCGCGCCGGTGGACTACACCTTCAACGAAGGCATTCTGAGCCAGGATTGCTGGGCGGTTCCGGCCGATGCCCCGCACAAGGCGGCGGCGATGAAGCTGCTCAACGAGATGTCGAAGCCGGAGCCGCAGGCAAACTTCTCCGTCATGGTGAAGTACGGCCCGCTCAACATGAAGGCCTACGCGACCGGTCTGATTTCGGACGCGACGGCGGCCAAGTTCCCCAGCTTCCCGGCCAACGCCGAAAAGATGGTGGTGCAGAGCGGTTCCTGGTGGGCTGAAAACACCGCCAAGGCGGACGCCGCCTTCGACGACATGATGAACAACTGA
PROTEIN sequence
Length: 352
MIGAGTNIFGCGVLVLGLLGPGAAFAQEVTIATSGGVVQEAGAKYLWNPAAKSLGLTVREETFDDGYQALRLQKDAGAVTYDIVQVPTFQAEIGFKEGLFGPLDYSVIDASEFPKAAAGPACIGFLASSWVLAWNTKVYKDNPPKSWADFWDVKKFPGRRAMHNDSEAQLEMALMADGVAPKDVYSVLSSPEGLKRAIDKLAELKPNIAVWWSSGSQSQQIMKDNEVDMAVMWNGRSEGLKAGGAPVDYTFNEGILSQDCWAVPADAPHKAAAMKLLNEMSKPEPQANFSVMVKYGPLNMKAYATGLISDATAAKFPSFPANAEKMVVQSGSWWAENTAKADAAFDDMMNN*