ggKbase home page

SCNpilot_cont_500_bf_scaffold_3890_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(2..457)

Top 3 Functional Annotations

Value Algorithm Source
IclR helix-turn-helix domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA07_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 152.0
  • Bit_score: 155
  • Evalue 4.70e-35
Uncharacterized protein {ECO:0000313|EMBL:CDX35390.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 151.0
  • Bit_score: 171
  • Evalue 6.80e-40
Transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 146.0
  • Bit_score: 153
  • Evalue 7.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGACAGCCTCGCGCGCATGCTCGCCATCTTCGACCTGTTTGACGGCGACCGCACCGCGCTCACGGCGGAGGAGATCGCGGCCGAGCTGAACTGTTCGGTGCCGACCGCCTATCGCTATCTGAAGACGCTGAGCACGGCGGGCCTGATCGCGCCCGACATCCAGCGCGGCTTCACGCTGGGCTCCCGCATCATCCAGCTCGACCGCCAGATTCGCCTCAACGACCCGCTGCTGCACCGCGCCGGCGACGTGATGGACGACCTGATCACGCGGGTGAAGGGCAACCTGATGGTGTGCGCCTATTACGGCAAGAACGTCGTCTGCATCGCCCAGGCCTGGCCCGACCGCACCGTGCTGACCAGCTACGATCGCGGCAGACCGATGCCGCTGCTGCGCGGCGCCGCCGGCAAGGCGATCCTTGCGCACCTGCCCGACCACAGGCTGCGCAGCCTGATG
PROTEIN sequence
Length: 152
MDSLARMLAIFDLFDGDRTALTAEEIAAELNCSVPTAYRYLKTLSTAGLIAPDIQRGFTLGSRIIQLDRQIRLNDPLLHRAGDVMDDLITRVKGNLMVCAYYGKNVVCIAQAWPDRTVLTSYDRGRPMPLLRGAAGKAILAHLPDHRLRSLM