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SCNpilot_cont_500_bf_scaffold_744_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 11400..12704

Top 3 Functional Annotations

Value Algorithm Source
diguanylate phosphodiesterase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037932A0 similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 473.0
  • Bit_score: 225
  • Evalue 8.10e-56
Cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF {ECO:0000313|EMBL:ERF83198.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 475.0
  • Bit_score: 221
  • Evalue 2.80e-54
diguanylate phosphodiesterase; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 440.0
  • Bit_score: 205
  • Evalue 4.60e-50

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGTCGAAGACCATAACCCTGCGCGCTGCGCCTCTTGTTCTGGGCATGGCGGCCGCTTTCGCCGCGCTGGCGTCGATGGGCGCGGCGCGCTTTCTCGACGCCTCGCCGCAGGTGGCCGCCCTGTTCGGGCTTTGCGCCGTCGGCTTCGCGGCGATCGTCATGGAGTTGCGCGCGCGCCGCAGACAGACGGAGCGGCTGGCCGACGCCGTGGGGGCGCTCGCCAGCGGCGTCGAGCGCGCCGGCGCGCAGCTCGCGGCGCTCGACGACAGGGCGCGCGACATCGAGCAATGGATCGCGCGCGACGCGAGACCGGGCGTGGAGCAGTCGGCGGCCGAGATCGAGATGCTCGGAACCCTGGTGAAGGAGCTCGCCGTCGCCGTCGCCCATCACGACGCCGAACTGGGCGCCGTCCCTTCAGCCGAGACCGACGCGCCCCCCGCCGCGCCAGCGCCCGCTCCAGCTCAGCCGGACAGGCGCGCGGTCGACGCCGCACTGGATCGTGCGATCGCCGATGGCGCCTTCGACCTTCATCTGCAGCCGATCGTGTCGCTGCCGCAGCGGCGCGTGAAATTCTACGAAGCCTTCGCGCGCCTGCGCGCCGCCAACGACGAGGACCTGCATGCGGCGCTGCAGTCCGGCGGCCGGACCCGGCTCTCGGCGTTCGACCTCGCCGCCCTGCGACGGCTGTTCGTCGTCACGCGGCGTCTGGCGAAAAGGAACAGGGACATCGCGGTGTTCGTGCGCGTCTCGGACCGCTCGATCGCCGAGCCGGAGGCGCTGATCTCCGCCCTGCATGGCGCGCAGGATCTCGCGAGCCACATCGTGATCCTCATGTCGCAGGCGACCGCCCGGCTGCTCGGCGGCGCGGGGCTGGCCAGGCTGCGGCCGCTTGTCGATCTCGGCTTCGGGCTCGGCGTCGACAAGATCGCGGATCTGCGGCTCGATCCGCGCACGCTGTTCGACCACGGCGTGCGCTACGTGAAGGCGCCGGCGGGCGTGTTTCTCTCCGACGCGGCGCGCGCGCCGACCGAGATCGACCCTCGCGACCTGTCGCGGCTGCTGACCCGCAACGGCGTCCAGCTCATCGCGGACGGACTCGACAGGGAAAACACGGTGGTCGAGATTCTCGACTTCGAGGTGCGGTTCGGGCAGGGCGACGCCTTCTCCCCGCCCCGCCCGGTGAAGCCCGATCTACTTGAACCGCTTCCCGAGCCGCCGGTGACGCCCTCTGCGCCCGCCGCCAACGATCCGCCGCCCGCGCAGCCGGAGCGCGTGTCCTATCGCTCCACCCTGCGGCGCGCCTAA
PROTEIN sequence
Length: 435
MSKTITLRAAPLVLGMAAAFAALASMGAARFLDASPQVAALFGLCAVGFAAIVMELRARRRQTERLADAVGALASGVERAGAQLAALDDRARDIEQWIARDARPGVEQSAAEIEMLGTLVKELAVAVAHHDAELGAVPSAETDAPPAAPAPAPAQPDRRAVDAALDRAIADGAFDLHLQPIVSLPQRRVKFYEAFARLRAANDEDLHAALQSGGRTRLSAFDLAALRRLFVVTRRLAKRNRDIAVFVRVSDRSIAEPEALISALHGAQDLASHIVILMSQATARLLGGAGLARLRPLVDLGFGLGVDKIADLRLDPRTLFDHGVRYVKAPAGVFLSDAARAPTEIDPRDLSRLLTRNGVQLIADGLDRENTVVEILDFEVRFGQGDAFSPPRPVKPDLLEPLPEPPVTPSAPAANDPPPAQPERVSYRSTLRRA*