ggKbase home page

SCNpilot_cont_500_bf_scaffold_632_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 2948..3862

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003086CF8 similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 292.0
  • Bit_score: 478
  • Evalue 4.80e-132
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 298.0
  • Bit_score: 485
  • Evalue 4.30e-134
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 295.0
  • Bit_score: 475
  • Evalue 1.30e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGCGTCTGCCGCTTTGCCCATCGCCGTCTCTGAAGGCGGCCTGTCGAGATATCTCGACGAAATCCGCAAATTTCCCATGCTGGAGCCGCAGCAGGAATACATGCTCGCCAAAAGCTGGCGCGAGCATGGTGACCGCGACGCGGCCCATCAGCTTGTCACGTCCCATCTGCGCCTCGTCGCCAAGATCGCGATGGGCTACCGCGGCTATGGGCTGCCGATCGGCGAGGTCATTTCCGAGGGCAATGTCGGTCTGATGCAGGCCGTGAAGCGGTTCGAGCCCGAAAAGGGCTTCCGTCTCGCGACCTACGCCATGTGGTGGATTCGCGCCTCGATTCAAGAGTACATCCTGCGCTCATGGTCGCTGGTGAAGATGGGCACCACCGCCAACCAGAAGAAGCTGTTCTTCAATCTGCGCAAGGCGAAGGGTCACATTCAGGCGCTCGACGACGGCGATCTCAAGCCGGATCAGGTCAAGACCATCGCTGAAAGGCTGGGCGTCCACGAGCACGAAGTGGTCGAGATGAATCGCCGTCTCTCCGGCGACGCGTCTCTGAACGCCCCGCTCCGGGAGGAAGGCGACGGCGAATGGCAGGATTGGCTGGTCGACGAGGGCACGAACCAGGAAAGCACGCTCGCGGAGCATGAGGAAAGCAGCAACCGCACGCGCGCGCTGAAGCAGGCGCTTGGCGTTCTCAACGATCGCGAGCGGCGCATTTTCGAGGCTCGCCGCCTTCAGGACGATCCGATGACCCTGGAGGATCTCGCCACCGAGTTCGGCGTGTCGCGCGAGCGCGTGCGGCAGATCGAGGTCCGCGCCTTCGAGAAGGTGCAGAAGGCCGTGCGCGAGGCCATCACGCGCATCGAAACTCCGAAACAGCTCGTCGCGGCCGAAACGGCCGCGACCCACGCTTAA
PROTEIN sequence
Length: 305
MASAALPIAVSEGGLSRYLDEIRKFPMLEPQQEYMLAKSWREHGDRDAAHQLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRASIQEYILRSWSLVKMGTTANQKKLFFNLRKAKGHIQALDDGDLKPDQVKTIAERLGVHEHEVVEMNRRLSGDASLNAPLREEGDGEWQDWLVDEGTNQESTLAEHEESSNRTRALKQALGVLNDRERRIFEARRLQDDPMTLEDLATEFGVSRERVRQIEVRAFEKVQKAVREAITRIETPKQLVAAETAATHA*