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SCNpilot_cont_500_bf_scaffold_638_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 1293..1532

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbL n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D243A similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 115
  • Evalue 2.80e-23
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAJ29879.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 115
  • Evalue 4.00e-23
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 55.0
  • Bit_score: 112
  • Evalue 5.80e-23

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Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGGTAACACGGGCGTCATCGACAATTTCCTCGGGGTCTTCACCTCCTACATTGACTCGGGTTTCGGCCTGCTCGGCGGCGAGGTTGCCTTCATCGCCACGACGCTGATCGTCATCGACGTGACGCTCGCCGCGCTCTTTTGGGCATGGGGCGCGGATGACGACACCGGATCGTCTTCGAGAGTTTCGCCGGCCTCGGCCTCATGGCGTCGGGCACCGGCTTTTCGGTTGCGGACCTGA
PROTEIN sequence
Length: 80
MGNTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWAWGADDDTGSSSRVSPASASWRRAPAFRLRT*