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SCNpilot_cont_500_bf_scaffold_718_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 2..397

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 131.0
  • Bit_score: 193
  • Evalue 2.50e-46
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 129.0
  • Bit_score: 190
  • Evalue 3.60e-46
tRNA pseudouridine synthase A n=2 Tax=Bartonella tamiae RepID=J0ZW28_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 131.0
  • Bit_score: 193
  • Evalue 1.80e-46

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Taxonomy

Bartonella tamiae → Bartonella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
TTCAACCGGCGCGCTCCGCCGGCGCTGGACAAGCATCGGGTCTGGCATATTCCGCGCAAACTGGATACGGAGGCGATGCAGGACGCCGCTCAGATTCTCGTCGGGCGCCATGATTTCACGACGTTCCGCGCCACCCACTGTCAGGCGAAAAGCCCGGTGAAGACGCTCGACCGCCTCGACGTGATCCGCAGGGACGACGCCGTGGATATTTTCGCCTCGTCGCGCTCGTTCCTGCACAATCAGGTGCGCTCGATGGTGGGATCGCTGGTCGAGGTCGGCTACGGACGCTGGACGCGCGACGATCTGCGCGCCGCGCTCGACGCGAAAGACCGCACGCGCTGCGGACAGGTGGCGCCGCCGCAGGGGCTTTATCTCATCGACGTGGATTATGAATAG
PROTEIN sequence
Length: 132
FNRRAPPALDKHRVWHIPRKLDTEAMQDAAQILVGRHDFTTFRATHCQAKSPVKTLDRLDVIRRDDAVDIFASSRSFLHNQVRSMVGSLVEVGYGRWTRDDLRAALDAKDRTRCGQVAPPQGLYLIDVDYE*