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SCNpilot_cont_500_bf_scaffold_816_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2176..3426)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE331B related cluster n=1 Tax=unknown RepID=UPI0003CE331B similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 406.0
  • Bit_score: 539
  • Evalue 4.10e-150
  • rbh
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESY64215.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 406.0
  • Bit_score: 539
  • Evalue 5.80e-150
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 411.0
  • Bit_score: 530
  • Evalue 4.60e-148
  • rbh

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
ATGACCGCGGACAGCGACGCCCGCGCGGTCGCGGAGGCGGTCGCGCGGCGCAGCTACGGCAAGCTCGTCGCCTTTCTCTCGGCGCGGTCGCGCAACGTGGCCGCCGCCGAGGACGCGCTCGCCGACGCTTTCGCCAGGGCGCTGACGGAATGGCCGCTGCGCGGAGCGCCGGACCGGCCGGAGGCGTGGCTGATGACCGTGGCGAAACGCAGGCTCATCGACGCATCGCGCCGCAAACGCACGGCGGACGACGCCGTCGAGCATCTGCGCCTGCTCGCCGACGAGGCTGGCGGCGATGCGGAAGCGATCCCCGACGAACGGCTCGCCCTGATGTTCGCCTGCGCCCATCCGGCGATCGATCCTGGCGTGCGCGCGCCGTTGATTCTGCAGACCGTGCTAGGCTTCGACGCCGCGACCATCGCTTCAGCGTTCCTCGTCGCGCCGGCGACGATGGGGCAGCGGCTCTCCCGCGCCAAGGCCAAGATCAGGCACGCCGGCGTGCCCTTCCGCATTCCCGATCGGAACGAGGCGCCGGAACGCCTGGAGGCGACGCTCGACGCGATCTATGCGGCCTTTTCGGAGGGCTGGACCGACCCCGCCGGAGCCGACGCCCGCCGCCGCAATCTCGCCGGCGAGGCGATCTGGCTCGGCCGCCTCGTCATGTCGCTGGCGCCGGAGGAGCCGGAGGCGCTCGGCCTCGTCGCCCTCATGCTGCATGCGGAAGCGCGCCGCGGCGCGCGGCGCGATCGCGCCGGCGAATTCGTGCCGCTGGCGGAGCAGGACCCCGCGCTCTGGAACGACGCCATGATCGCCGAGGCGGAGACGCTGCTCGCGAAGGCGAGCCGGATGGCGGGCGCTGTCGGACGCTATCAGCTCGAGGCCGCCGTGCAGTCCGCCCATGCGATCCGCCGGCGCGCCGGAACCGCCGACTGGCGGGCGATCGCCGCGATCTATGACGCGCTGGTCGCGATGACGGGATCGCCGGTCGTCGCCATCAACCGCGCGGTGGCGATCAGCCACCGCGACGGCGCGTCGGAGGGCCTTGCGGCGCTTGACGAACTCGTTCTCGACGCCCGGCTCGCGGAGTACCAGCCCTACTGGGCCGCGCGAGCCGATCTCGCGGCGCGGACCGGCGATAGTGCGGAAGCCTCGGCCGCCTATCGCCGCGCGATCGGATTGGAGCCCGATCCCGCCGTTCGGCGCTTTCTTCTGCGCCGCGAAGCCGCGCTGCATCGTCACGGCGCGGATTGA
PROTEIN sequence
Length: 417
MTADSDARAVAEAVARRSYGKLVAFLSARSRNVAAAEDALADAFARALTEWPLRGAPDRPEAWLMTVAKRRLIDASRRKRTADDAVEHLRLLADEAGGDAEAIPDERLALMFACAHPAIDPGVRAPLILQTVLGFDAATIASAFLVAPATMGQRLSRAKAKIRHAGVPFRIPDRNEAPERLEATLDAIYAAFSEGWTDPAGADARRRNLAGEAIWLGRLVMSLAPEEPEALGLVALMLHAEARRGARRDRAGEFVPLAEQDPALWNDAMIAEAETLLAKASRMAGAVGRYQLEAAVQSAHAIRRRAGTADWRAIAAIYDALVAMTGSPVVAINRAVAISHRDGASEGLAALDELVLDARLAEYQPYWAARADLAARTGDSAEASAAYRRAIGLEPDPAVRRFLLRREAALHRHGAD*