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SCNpilot_cont_500_bf_scaffold_7145_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_65_8

near complete RP 52 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 3627..4463

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus B4 RepID=T1XAC4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 273.0
  • Bit_score: 304
  • Evalue 1.50e-79
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 273.0
  • Bit_score: 304
  • Evalue 4.70e-80
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU49882.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 273.0
  • Bit_score: 304
  • Evalue 2.10e-79

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
GTGGCGCGCAAGGATCCCCGCAATACGTCCCGCTTCTGGCGGGCCGCGCAGGTTCCGGGCCTGACCTGCCTGCACGCGGATTTCACCGATCACGACTATGCGCCTCACATCCATGACGCGCTCGTCGTCGCCATCACCGAATTGGGCGGAGCCGAGTTCAGGAGTCGCGGCGCGACCGGCGAGGCGCGCGCGGCGCGGGTTCTGGTGTTCAATCCGGCCGAGCCGCATTCAGGCCGCATGGCGGCCAGCCGGCGCTGGCGCTACCGCGCATTCTATCTCTCCGAGGAGGCGATCGCGGCGGCGACGGTGTCGGCGGGCGTGGACAAACCCCGCTACTTCACCTCCAATATTCTCGACGACGGGCGGCTCGCCGAGACATTCCTATCCCTCCACATGGCGTTGGAGGAGGGGCGTGATCCGTTTGCGGCGAGCGAGCTGTTCGCAGGCGGCTTTCGCGCGCTCTTTTCCCGGTCCGGCGATCCGCCGAGGGAAGGAGGGGCCGTGGGGCCAGACCGGCGCCGGCTGGACCGCGTGACGGCCGAAATGCGGGAGCGGCTGTCAGAGAGCCTGACGCTCGACGATCTCGGCGCAGACGCCGGCCTGACCGCGTTCCAACTCATCGCCCTGTTCAAGCGCCATACCGGCCTGACGCCGCACGCCTATCTGACCCATCTCAGGATCGGCGCCGCTCTTGCCCGCGTCCGCGCCGGCGAGCCGATCGCGCGCGCGGCCGTCGCCGCCGGCTTCTACGACCAGAGCGCGTTCAACCATCATTTCAAGCGAACGCACGGCGTCACGCCGCTGCAATATCTCGCATCGACTGGCGAGGCCGCCTGA
PROTEIN sequence
Length: 279
VARKDPRNTSRFWRAAQVPGLTCLHADFTDHDYAPHIHDALVVAITELGGAEFRSRGATGEARAARVLVFNPAEPHSGRMAASRRWRYRAFYLSEEAIAAATVSAGVDKPRYFTSNILDDGRLAETFLSLHMALEEGRDPFAASELFAGGFRALFSRSGDPPREGGAVGPDRRRLDRVTAEMRERLSESLTLDDLGADAGLTAFQLIALFKRHTGLTPHAYLTHLRIGAALARVRAGEPIARAAVAAGFYDQSAFNHHFKRTHGVTPLQYLASTGEAA*