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SCNpilot_cont_500_bf_scaffold_1201_12

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 17345..18724

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SHD7_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 453.0
  • Bit_score: 585
  • Evalue 4.20e-164
  • rbh
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 453.0
  • Bit_score: 585
  • Evalue 1.30e-164
  • rbh
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ADB77091.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 453.0
  • Bit_score: 585
  • Evalue 6.00e-164

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
GTGGATCTCCCGCCCCTGCCGCTCGACCGCGACGACGAGCGGCCGCTCGCCACCCAGCTCGCCGACGCCCTGCGCGCCGCGACGGCGGGCGGCGCGTTCCGGGCGGGGGACCGGCTGCCCTCGACGCGGGCGCTGGCGACGACGCTGCAGGTCAGCCGCACCGTCACCGCGGCCGCGTACGACCAGCTGCTGGCCGAGGGCTGGGCGGTCGGCCGGCGCGGGGCGGGCACGTTCGTGGTGGGCACGCCGGCCGGGACGCATGCGGCGACGCCCCGTCCGTCCACGCCGCCGGCGCGTCGGGACCCGGCCGACGTCGACCTGTTCGCCGGCACCCCGTGCGTCGAGGTGCTCGACGCGTCGGTCTGGCGGCGGGCCTGGCGCGCCGCGGCCGACGACCCGCCCGACGCGGACCCGGAGCCGGTGGGGCTCCCGGCGTTCCGCGCGGTGGTCGTCGAACACCTGCTGCGCCACCGGGGGCTCCCGGCCGGTCCCGACGACGTCCTGGCCACCGGCGGCAGTACCGGGGCCGTGGCCGAGCTCGCGCGGACGCTGCCCACCGGTGCGCGGGTGGCCGTGGAGGAGCCGGGTTACCAGCGGGCGGTCGCGGCGCTGCGGGCGGCCGGGCTCGTCGTCGTGCCGGTGCCGGTGGACGCGTCGGGTCTGGTGGTCGAGGCCCTGCCGACCGGGCTCGCCGCCGTCTACGTCACGCCCGCGCACCAGTACCCGATGGGGGCGCGGCTGCCCGCGGCGCGGCGGGTCGCGCTCGTGGACCGGGCGCGGGCCGAGGGGTTCCTCGTGATCGAGGACGACTACGACGGCGAGTTGCGCTACGACGTGGCCCCGCTGCCGCTGCTGGCCGGGCTCGGACCCGATGTGGTGGTGCACCTCGGTACGGCCAGCAAGCTGCTCACCCCGACGCTGGGCGCCGGCTGGATGGTGGCGCCGCCGGCCGTGCGGGCGGCCGTGCTGGACCTGCGCGACCGCACCGGTACGCGGCCGGCCCGGGCCGGGCAGCGGGTCTTCACGGCGTTCGCGGCCCACGGCGACCTGGGCCGGCACCTGCGGAGGCTGCGCCGCGAGCTCGCGTCCCGGCGGGCCGCGGTCGCCGAGGCCGTCGGCCGCGCCGTCGTCGGCGACCAGGCCGGCGCGCACGTCGTGGTCCCGCTGCCCGACGCGGCGGCGGAGCGGGCGGTGATCGCGGCAGCCGGCCGGCGCGGCGTGGCCCTGGACGGGCTGGCCCGCCACCACCTCGGTGGGCCCGGCGTGCACGGCATCCTGCTCGGCTACGCAGGCCCGTCGCGGGCGGACCTCGACCGGGCCCTGCCCGTCGTCACCGCAGCGCTCGTGCGGGTGTCGTCGGGCGTGCCGCGCTGGTCGTGA
PROTEIN sequence
Length: 460
VDLPPLPLDRDDERPLATQLADALRAATAGGAFRAGDRLPSTRALATTLQVSRTVTAAAYDQLLAEGWAVGRRGAGTFVVGTPAGTHAATPRPSTPPARRDPADVDLFAGTPCVEVLDASVWRRAWRAAADDPPDADPEPVGLPAFRAVVVEHLLRHRGLPAGPDDVLATGGSTGAVAELARTLPTGARVAVEEPGYQRAVAALRAAGLVVVPVPVDASGLVVEALPTGLAAVYVTPAHQYPMGARLPAARRVALVDRARAEGFLVIEDDYDGELRYDVAPLPLLAGLGPDVVVHLGTASKLLTPTLGAGWMVAPPAVRAAVLDLRDRTGTRPARAGQRVFTAFAAHGDLGRHLRRLRRELASRRAAVAEAVGRAVVGDQAGAHVVVPLPDAAAERAVIAAAGRRGVALDGLARHHLGGPGVHGILLGYAGPSRADLDRALPVVTAALVRVSSGVPRWS*