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SCNpilot_cont_500_bf_scaffold_2635_5

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 4307..4708

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXD0_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 79.0
  • Bit_score: 76
  • Evalue 2.40e-11
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 79.0
  • Bit_score: 76
  • Evalue 7.70e-12
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:AHH19006.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 79.0
  • Bit_score: 76
  • Evalue 2.60e-11

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Taxonomy

Nocardia nova → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTCGTTCTCGTCTTCGTCGATGTCCCCGGTCACCGCGCCCACGCGCCGCGAGCAGCGGCGTGCCGCCACCCTTGTTGACATCCGCACCGCCGCACGGACGCTGCTGGCCGAAGGGGGGCCCGACGCGGTGACGCTACGCGGCATCCCCGCTCGGCTCGGCATGGCCTCCGCAGGCGTGCACTACTACTACGCCTCACGCGACGAACTGCTCACGGCGCTGGTCATCGACGCCTTCGACGATCTCGCCCGGCTCACGGACGGGGCCTCCTGCGGCCGCCGCACCCGGAAGCAGGCCTGGACCGAGGCCGCGGGCCTATCGTTCGCTGTCGAGCTGTGCCATCGCAGCTGCGGGGTACCGATCACCGTGGGCCGCGTTGCGGGGGACGGCCTGCCCGATTGA
PROTEIN sequence
Length: 134
MSFSSSSMSPVTAPTRREQRRAATLVDIRTAARTLLAEGGPDAVTLRGIPARLGMASAGVHYYYASRDELLTALVIDAFDDLARLTDGASCGRRTRKQAWTEAAGLSFAVELCHRSCGVPITVGRVAGDGLPD*