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SCNpilot_cont_500_bf_scaffold_2635_7

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5724..6569

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Frankia sp. BCU110501 RepID=UPI000376F87F similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 280.0
  • Bit_score: 374
  • Evalue 1.20e-100
  • rbh
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 280.0
  • Bit_score: 368
  • Evalue 2.70e-99
  • rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABW13178.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 280.0
  • Bit_score: 368
  • Evalue 1.20e-98

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGACCGAGCCGCGCTCGCCGACCTGCTGCGCAACCGCCGCGAGCGGCTGACACCTGCCGACATCGGGCTGCCCCCCGGCATCCGGCGCCGCACGCCTGGCCTGCGCCGTGACGAGGTCGCGGGCCTCGCGGCGATCTCGACCGACTACTACACCCGTCTCGAGCAGCAGCGCGGCCCGCATCCCTCGGTTGACGTGCTGACCTCACTTGCACGCGCACTTCGATTCACCGACGACGAGCGTGACCATCTGTTCCACCTGGCCGGGCAGGCGCCGCCGTCACGGCACGTCGCGAGCGCGCATCTGAGCCCTGGGCTGCTGTATCTGCTCGATCGGCTCACCGACTGCCCGGCGATGGTCGTCGACGACCTCGGGGTCGTCCTGGCCCAGAACGCGATGTCGGTCGCGATCACCGGCGACATCTCGGCGCTGCGCGGGCAGCACCGCTATTCCGCGTGGCGCTGGTTCTGCGTCCCCGGCTCCCGCGATCGCATTCCGCAGGAGGACTGGGACGCGCACTCCCGCACGCAGGTCGCGGACCTGCGTGCGACGCACGGCCGGCGCGGGGCCGACCCAGACGTCGGGCGGCTCGTGACCGACCTGAAGACCGGGTCGGCCGAGTTTGCCGGCCTGTGGGAGGTGCACGACGTGGGGGTACGGCGTGCCGACGCCAAACGCGTCGATCATCCAGAGGTCGGCGTGCTCGACCTGCTGTGCGAAACGCTGGTCAGCGCGGTGGGCGGCCAGACGGTCGTAGTGCTTCATCCGCGACCCGGCACCGGCACGCGCGAGAAGCTGGATCTGCTGCGCGTCATCGGCGTGCAGGATCTCGCCGTCGCACCCTGA
PROTEIN sequence
Length: 282
MDRAALADLLRNRRERLTPADIGLPPGIRRRTPGLRRDEVAGLAAISTDYYTRLEQQRGPHPSVDVLTSLARALRFTDDERDHLFHLAGQAPPSRHVASAHLSPGLLYLLDRLTDCPAMVVDDLGVVLAQNAMSVAITGDISALRGQHRYSAWRWFCVPGSRDRIPQEDWDAHSRTQVADLRATHGRRGADPDVGRLVTDLKTGSAEFAGLWEVHDVGVRRADAKRVDHPEVGVLDLLCETLVSAVGGQTVVVLHPRPGTGTREKLDLLRVIGVQDLAVAP*