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SCNpilot_cont_500_bf_scaffold_2771_3

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6412..7599)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerC n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X3S5_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 393.0
  • Bit_score: 343
  • Evalue 3.20e-91
  • rbh
Site-specific recombinase XerC {ECO:0000313|EMBL:EHR52143.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 393.0
  • Bit_score: 343
  • Evalue 4.40e-91
Integrase family protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 396.0
  • Bit_score: 342
  • Evalue 2.20e-91
  • rbh

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Taxonomy

Saccharomonospora marina → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGCGCGGCCTCCGCTGCCACTCGGCAGCTACGGGAAGATCAAGACCTGGCAGGACGGCGGCGCGTGGATCGCTCGCGCCCAGTTCCGCGACTTCGACGGCGTGGTCCGCATGGTCAAGCGGCGAGCGGTCTCCAAGGCGGCAGCGGAACGGGCGTTGCGCGCTGCGCTCGTCGAGCGGCAGGCACCGGGCAAGGTCGCGGAGGTCTCGCCCTCGACGACGTTCGGCAAGGTGGCGGATCTGTGGTTGGCGGAGGTCGAGCGGGCGGTCGACGCGGGCACACGGAGCCCAGGAACGCTGGACACCTACCGGTCCATCCTGCGGCGGCACGTGCGGCCGGCGCTCGGTCAACTCCGGGTGCGGGAGGTGACGACGCCCGTGGTGGACCGCGCGCTGACGGTCATCATGCAGCGCTCGGTGAGCGGCGCGCGCACGTCGAAGATCGTCATATCGGGGACCATGCGCTACGCGGCTCGGCACGGGGCGGTGGCCGTGAATCCCGTTCGGGAGGTCGGCCGGATCGAGAGCCTGCCCCGGCGTCAGCCTCGCGCGCTGTCGGCGGAGCAGCGTCAGGAGTGGCTTGACGTCGTCGAGGCGAGCGAGCAGGCGCGAACCTGGGACCTGCCCGACCTCACCCGAATGATGCTGGCGACGGGCTGCCGGATCGGAGAGTGCCTGGCGATCGGCTGGTCGGAGATCGACCTCGACGCCGCCGCGGTGGACGTGTGCTGGCGACTCGTCCGGCGAACCGGTGTGGGCCTGCTGCGGCTGCCGTCGACGAAGTCCGGACGCAAGGGTGAGCGGCTGATCCCACTCCCCAGCTGGGCCGTCACGATGCTGAAGCGCCGCCGGCTTGCGATCGGCCCGGGCGTGGAACCGGTGTTCCCGGACTCGCTCGGGGCCTGGCGCGACCCGTCGAACGTCCGGAAGGTCTGGCGGCAGGTGCAGACCGGCGCTGAGATGGACGGGTTCGTGAGCCACACGCTGCGCAAGACGGTCGCGAGCTTCCTCGACGACGCTGCGGTGTCCACGCGGAAGATCAGCGACCAGCTCGGCCACTCCAAGGTGAGCATGACGCAGGACCGCTACCTCGGGCGCCGGCTCACCGACCGGGAGACCGCGGACGTCCTGGAGAACCTCTTCGACGAGGGCCCGGGAGACGAAAAACGTCCCAAAAGTGTCCCGTGA
PROTEIN sequence
Length: 396
MARPPLPLGSYGKIKTWQDGGAWIARAQFRDFDGVVRMVKRRAVSKAAAERALRAALVERQAPGKVAEVSPSTTFGKVADLWLAEVERAVDAGTRSPGTLDTYRSILRRHVRPALGQLRVREVTTPVVDRALTVIMQRSVSGARTSKIVISGTMRYAARHGAVAVNPVREVGRIESLPRRQPRALSAEQRQEWLDVVEASEQARTWDLPDLTRMMLATGCRIGECLAIGWSEIDLDAAAVDVCWRLVRRTGVGLLRLPSTKSGRKGERLIPLPSWAVTMLKRRRLAIGPGVEPVFPDSLGAWRDPSNVRKVWRQVQTGAEMDGFVSHTLRKTVASFLDDAAVSTRKISDQLGHSKVSMTQDRYLGRRLTDRETADVLENLFDEGPGDEKRPKSVP*