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SCNpilot_cont_500_bf_scaffold_3536_5

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6016..7215)

Top 3 Functional Annotations

Value Algorithm Source
Putative CdaR family transcriptional regulator n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V7M7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 389.0
  • Bit_score: 310
  • Evalue 3.00e-81
  • rbh
Putative CdaR family transcriptional regulator {ECO:0000313|EMBL:GAC86252.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 389.0
  • Bit_score: 310
  • Evalue 4.20e-81
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 281.0
  • Bit_score: 115
  • Evalue 4.40e-23

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Taxonomy

Gordonia paraffinivorans → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCCGAACTCCGGGACCGGAGCCAGGTCGACGACGCCGTCGCACCCACCCATTGCGGAGTTCGTCACCTGGCTCGACCAGCGCGTCGCCCGCATCGTCGACGACATGTACGCCGCCGTCGTCGCCGCCACGCCCTCCGTGGTGCGCGACGACGAGGACGTGCGGCTGCTCCGCGAGGCCCTGGACTCCCACATGCCGCTGCTGAGGGACGCCGCGCAGTCGGCGACACCCAGGGTGGGTGTGCAGCTGGGCCGGCCCGCGGAGCGCTGGTCCCGCCGGCTCGCCAGGGCCGAGACCGACCTGGCCGACCTGGTGCTCGCCTACGACGCCGCTGCAGACGTGATCGTCGCGACCTTCGCGGCGCACCTGCGTGAGAGCGGAGTGTCCGACGCCCGCCGGGCCGACGCCCTCGAGACCGTGCTGGACCGGCTCTTCCGCTACCTGCGCACCGCCTGCGCCGCCGCGACCGCGGCCTACGTCCAGGAGCGCGAGCTCCTGCGCCAGCGCGACGCCTCCGACCTGCGGGCGGTGATCGTCGACGTGCTCGCGGGGACAGCGGACAGCACCGCTGCCGAGGCACGTCTGGGCTACCGCTTCGCCGACACCCACACCGCCTTCGTGATCTGGGGATCGCACGCCACCTCCGCCGAGCTCGACCGCGCCGTCGCCCGGCTCCGCGCCGTCGTCCGTCCCCGTCAGCTCGTCGCGGTTCCGGACGGACCCACGGCCGTTCACGGCTGGTTCTCGGGCGGCGGCGTCGAGGCCTGGATGTCGGGCACCTCGGGATTGCGCCTCGCCCTCGGCAGCCCGCACCCGGGCCTCGCCGGGTTTCGGGCCTCGCACCGGGAGGCTGTCGAGACATGCAAGCTCGCCACCCGCTGGGTCGACGGCCCAGTGGTCCGGTTCGACGACGTCGTGGTGCTCGCCCTGGCCGACGGCACCCCCGGACTCGCCGCGCCCTGGGCAACCGCGCGGCTGGGTGCCCTCGCCGACCCCGCCCACTCCGACCTCCTGCAGACCCTCCGGATCTGGCTGGCCGAGCTGGGCAGCCCGACCCACGCGGCACGCAGGCTCACCGTGCATCCCAACACGGTCGTGAAACGGCTGGAGCGGATCGCGGCGCTGCTCCCGGTCCCGTTGGATCCGAGGTCCGCCGTACTGCGGGTCGCGGTGGAACTCGCACCCCTCACCCGAGGCTGA
PROTEIN sequence
Length: 400
MPNSGTGARSTTPSHPPIAEFVTWLDQRVARIVDDMYAAVVAATPSVVRDDEDVRLLREALDSHMPLLRDAAQSATPRVGVQLGRPAERWSRRLARAETDLADLVLAYDAAADVIVATFAAHLRESGVSDARRADALETVLDRLFRYLRTACAAATAAYVQERELLRQRDASDLRAVIVDVLAGTADSTAAEARLGYRFADTHTAFVIWGSHATSAELDRAVARLRAVVRPRQLVAVPDGPTAVHGWFSGGGVEAWMSGTSGLRLALGSPHPGLAGFRASHREAVETCKLATRWVDGPVVRFDDVVVLALADGTPGLAAPWATARLGALADPAHSDLLQTLRIWLAELGSPTHAARRLTVHPNTVVKRLERIAALLPVPLDPRSAVLRVAVELAPLTRG*