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SCNpilot_cont_500_bf_scaffold_6152_9

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3890..5785)

Top 3 Functional Annotations

Value Algorithm Source
Integrase domain protein SAM domain protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L5G2_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 541.0
  • Bit_score: 219
  • Evalue 1.10e-53
integrase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 541.0
  • Bit_score: 219
  • Evalue 3.50e-54
Integrase domain protein SAM domain protein {ECO:0000313|EMBL:ABW11972.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 541.0
  • Bit_score: 219
  • Evalue 1.50e-53

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1896
ATGACCCGAACACCGGCGCTGATCGTCTGCGCGGGGTGCGGGCACCAGGCAGCGCACCACGCCAAGGGCCGCTGCGCGCGCTGCTACCCGAGCACCCGGGCCCGGATGATCACCTGCCCGGACTGCGGTGAGGCCCGCGCGCATCACCGGGGCGGGCGGTGCGTGCGCTGCTACCGGCACGCCCGCACCGTGCTCGCTGACTGCGCGGTCTGCGGGGAGCACCGGGCCACCCGGGCCGGGACCTGCCAACGCTGCAAGCAGCGCCGCCGGGCCGCCGCGGGCACCTGCACCGGCTGCGGGCGGCCGGTGGCGCGGCTGTGGTCGCGGAGGTGCGCGCGGTGCGCGAAGACGTCGTGGACGGTGGGCAGCTGCGCGGACTGCCTGGCCTGGGCGGCCAGCATCGCCGCCGGCCGGTGCCGGGCCTGCCGGGAGTTCGCCCGCCGCGGTGCCACCGGGCGGTGCCGGTCGTGTCGCCGTGAGCTGGCGATCAACCGGCACGGCCGCTGCCGGCTGTGTGTGGCCAGCCGCCGCGCCCCCCGCCCGGGCGGTGAGTACGACCGCGACCTCGAGCCGGGCGAGCGCGCCGGCATCCAGTTGTTCCTCGGTGACATGCACGGCCAGGGCCGCCCCTCGCCGAGCGCGGGTGACCAGACCGGCCCGTCCATCAGTGGCGACGACCACGGCGACCGCGACGACCGCGACGGGCAGCTGGAGCTGTTCGCCCAGCCGCGAGTCCACCATCTCGACACCCTGTTCGCGGACTGGGTGCGCTCACCGACCGGGGCCGCCCTGCAGGCCGATCTGGCCGGGTTCGCCGCGGCCCGCGGCTGGCCGTCGGCGACCACCCGCGCCGTCGGGCGCGGCCTGGCCCGCGCCGCGCTCACCGAGCCGGCCTTCGACCTCGCCGACGTCGCGTTGATGACCTGGCTGCGCCGCTACCGGGTGCCGATCGGTCGGCTGCGCGAGTTCGTCGCGGCCCACGACCTGCAACCACCACCGGCCGACCCGGCCGGCACGACCGGGCGGTGGGCCGGCCCGCTGGGCGCCGGGCTGCCGGCCGCGATGGCAACCGAGGTGACCGCCTGGCTCGAGGTGCTCACCGCGACCAGCGGCCGCGGGCGGGCGCGCGCCCGCGCCACCATCGACCACTACACCGCCGCGGTCGCGCCCGCGCTCACCGAGTTCGCCGCGCGCTACGACTCGCTGCTCCAGGTCAACGAACACGACATCACCGCCGTGCTCGAGCCGCTGCGCGCCGCGGCGCGCAGCACCACCGCGGTGGCGCTGCGCTCGCTGTTCGCCACCCTCAAATCCCGCCGGCTGATCTTCGCCGACCCCACCCGGCGGGTCCATCCCGGACGGTTCCCCCGCCGGCCCGTGCTCGGGCTCGACCCGAGCACCCGCGCCGGGCTGCTCGACCAGCTCACTCGCCCCGACCACCGGCTCGTGGTCCTGCTCGCCGGGGTGCACGCGCTGCCGAGGGCCGACATCACCGGCCTGCGCATCGACGATGTCGCCCTGCCCACCGGCGGCGGCACCGCCACGATCACCGTCCACGGCACCCGGCGCGGCCTCGACGAGCCGACCGGCGCCGCGCTCGCCGACTGGCTGCGCGAGCGCCGCCGACGCTGGCCGGCCAGCGCGAACCCGCACCTGCTGATCAGCACCCGCTCCGCGCTCGGGCTCGGCCCGGTGTCCACCGGCTACCTGCGCGGCGTCACCGCCGAACTGCCGGTCACCCTGCACCAGCTGCGCGCCGACCGGCTGCTCACCCAGGCCCGCGACACCGGCGGCGACCCGCTGAGCCTGCACCGACTCTTCGGCCTGTCCGCCGACACCGCCCTGCGCTACTGCGCCGAGCTCGACCCACCCAAGCACGCCACCGACAGCCGCTGA
PROTEIN sequence
Length: 632
MTRTPALIVCAGCGHQAAHHAKGRCARCYPSTRARMITCPDCGEARAHHRGGRCVRCYRHARTVLADCAVCGEHRATRAGTCQRCKQRRRAAAGTCTGCGRPVARLWSRRCARCAKTSWTVGSCADCLAWAASIAAGRCRACREFARRGATGRCRSCRRELAINRHGRCRLCVASRRAPRPGGEYDRDLEPGERAGIQLFLGDMHGQGRPSPSAGDQTGPSISGDDHGDRDDRDGQLELFAQPRVHHLDTLFADWVRSPTGAALQADLAGFAAARGWPSATTRAVGRGLARAALTEPAFDLADVALMTWLRRYRVPIGRLREFVAAHDLQPPPADPAGTTGRWAGPLGAGLPAAMATEVTAWLEVLTATSGRGRARARATIDHYTAAVAPALTEFAARYDSLLQVNEHDITAVLEPLRAAARSTTAVALRSLFATLKSRRLIFADPTRRVHPGRFPRRPVLGLDPSTRAGLLDQLTRPDHRLVVLLAGVHALPRADITGLRIDDVALPTGGGTATITVHGTRRGLDEPTGAALADWLRERRRRWPASANPHLLISTRSALGLGPVSTGYLRGVTAELPVTLHQLRADRLLTQARDTGGDPLSLHRLFGLSADTALRYCAELDPPKHATDSR*