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SCNpilot_cont_500_bf_scaffold_2012_9

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 8385..8684

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Y7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 68.0
  • Bit_score: 86
  • Evalue 2.30e-14
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CEG08978.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 68.0
  • Bit_score: 86
  • Evalue 3.20e-14
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 60.0
  • Bit_score: 81
  • Evalue 1.40e-13

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCCTCCTGAGTCTGCATGTACACCACTTCAAACGCGTACGCCCTCAAAGCAACTGGTGTCTCAGTTGATTGGCGCGACCGTCAGCGAAGTTGAGCGAGAACTGGTGTTGCAGACGATCATTCATTGCAACGGCAATCGGACTCGCGCCGCACGCATGCTCGGGGTGTCTATCCGTACGATCAGGAACAAGCTCCGCGAATATTCGGCTGCGGCGGAAACCTATCCGCGCCAGTTGACAAGCAGAGCGCCCCGCACTTCGGGAGCGAAGAAGCCCTCTTCTGAAGCCGCATTTCAATGA
PROTEIN sequence
Length: 100
MPPESACTPLQTRTPSKQLVSQLIGATVSEVERELVLQTIIHCNGNRTRAARMLGVSIRTIRNKLREYSAAAETYPRQLTSRAPRTSGAKKPSSEAAFQ*