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SCNpilot_cont_500_bf_scaffold_4937_21

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_12_partial

partial RP 22 / 55 MC: 1 BSCG 23 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(18899..20053)

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 389.0
  • Bit_score: 657
  • Evalue 2.30e-186
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR09_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 389.0
  • Bit_score: 657
  • Evalue 7.40e-186
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module {ECO:0000313|EMBL:ABE61338.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 389.0
  • Bit_score: 657
  • Evalue 1.00e-185

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
GCCCCCTCCGGCGGACGCGACGTGCACTGGCTCAAGCCGGAGTTGGTCGCCGAAATCGAATTCGCCGGCTGGACCCATGACGGCATGGTCAGGCAGGCCGCCTTCAAGGGTTTGCGCGCAGACAAGCCGGCCGGCGAGGTCAAGGCGGAGATGCCGGTCCGTACGGCGGTGCCCAAGCTCGACGCAAGGGCCGCGGCCACGGCGCGCACGCAGACCACGACGTCGCGCCCGCCGCACGCGTCTTCGGCGCGGGATCGCGCGACGGTCATGGGCGTTGCGATCACGCATCCGGACAAGGCGCTGTGGCCCGATGGCGGGGACAAACAACCGGTCACCAAACGGGACCTCGCCGAATATATGGAGACCGTCGGCGCTTGGATGATGCCACACATTCAGGGGCGGCCGTGTTCGATCGTGCGCGCTCCGGACGGCATCGACGGCGAAACCTTCTTCCAGCGTCATGCCATGCCGGGGATGTCGGACCTCGTCACCCAGGCTAAAGTGCATGGCGACCGTAAGCCTTATCTTCAGATCGATCGCGTCGAAGGCCTGATCGCGGTGGCGCAAATCGGCGGACTTGAACTGCATCCGTGGAATTGCGCGCCCGATCAATACGCCGTGCCGGGACGACTGGTGTTCGATCTCGATCCGGCGCCAGGTGTCGCATTCTCCGATGTGATCGCGACGGCAAGGGAGATGAAGCAGCGCCTTGAGGCGCTCGGACTTGAGCCATTCTGCAAGACCACAGGCGGCAAGGGCCTGCACGTAGTCACGCCACTTGCCACCGCCAAAAAGGAAACGCTAACCTGGAAGCAAGCCAAGATGTTCGCGCAGGCCGTGTGCGAACAAATGGCAGCGGATGAACCCGACAAATATCTCATCAACATGTCGAAGAAGCAGCGCGAGGGCAAAATCTTTCTGGATTATCTTCGCAACGACACCAAGTCGACCGCTGTGGCGCCGCTGTCGCCGCGTGCGCGCCCCGGCGCGACCGTGTCGATGCCGCTGAACTGGTCGCAGGTGAAAGCCGGCCTCGATCCCAAACGTTTCACGCTTCGCACCGCCGCTGACCTCCTGAAGAAAAGCAAGGCGTGGTCGGGTTACGACGGGGCGGCCCGCCCGCTGCAGGCCGCGATCGCAAAGCTGCTCCGATGA
PROTEIN sequence
Length: 385
APSGGRDVHWLKPELVAEIEFAGWTHDGMVRQAAFKGLRADKPAGEVKAEMPVRTAVPKLDARAAATARTQTTTSRPPHASSARDRATVMGVAITHPDKALWPDGGDKQPVTKRDLAEYMETVGAWMMPHIQGRPCSIVRAPDGIDGETFFQRHAMPGMSDLVTQAKVHGDRKPYLQIDRVEGLIAVAQIGGLELHPWNCAPDQYAVPGRLVFDLDPAPGVAFSDVIATAREMKQRLEALGLEPFCKTTGGKGLHVVTPLATAKKETLTWKQAKMFAQAVCEQMAADEPDKYLINMSKKQREGKIFLDYLRNDTKSTAVAPLSPRARPGATVSMPLNWSQVKAGLDPKRFTLRTAADLLKKSKAWSGYDGAARPLQAAIAKLLR*