ggKbase home page

SCNpilot_cont_500_bf_scaffold_372_27

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: comp(30405..31232)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 269.0
  • Bit_score: 425
  • Evalue 8.10e-116
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 269.0
  • Bit_score: 418
  • Evalue 1.30e-114
Shikimate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 269.0
  • Bit_score: 425
  • Evalue 5.80e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCCAGCCATCCCAGTTCGCCGTGTTCGGCCATCCGGTCGCGCACTCGCTGTCGCCGCGCATCCACCAGGCCTTCGCGCAGCAGTCCGGCATCGCGCTGGAGTACCGCGCCATCGACGCGACGCCGGAGGCGTTCGCCGCCGCGGTGCGCGGGTTCTTCGCCGCGGGCGGCGCGGGCGCGAACGTCACGCTGCCGCACAAGGGCGCCGCGTTCGCGCTGGCGGACGAACGCAGCGAGGCGGCCACGCGCGCCGGCAGCGCGAACGTGCTCTCCCCCCTGCCCGGTGGTCGGCTCGCCGCGCACAACACCGACGGCGCCGGCCTGCTGCGCGACCTCACCGAGCGCCACGGCGCCGACCTGCGCGGTCGCGATGCCTTGCTGCTGGGTGCCGGCGGCGCGGCGCGCAGCGCAGCCTGGGCGCTGCTGGATGCGGGCGTGGAGACGCTGACCATCGTCAACCGCACGCCGGAAACCGCCGACGCGCTGGCCGACGCGATCGGCGAACCCGCCCGCGTGCACACGCGCTACTGGGACGATCTTGCGAACCTCGGCAGTTACGACCTCATCCTCAACGCAACGTCGGCCGGGGTGCTGGGCGGCGGACTGAACCTGCCGATGTCGCTGGTGGGCGCGCGCGCGTCCTGCTACGACCTGGCCTATGGCGCCGCGGCGGTCGGCTTCATCGCCTGGGCGACGGCCGCGGGCGCGCGCCATGCGTGGGACGGGCTGGGCATGCTGGTGGAGCAGGCGGCCGAGGCGTTCGCGCTGTGGCACGGCACGCGCCCCGACACCGAGCCGGTGTACCAGGCGCTGCGCGCCGGCTGA
PROTEIN sequence
Length: 276
MSQPSQFAVFGHPVAHSLSPRIHQAFAQQSGIALEYRAIDATPEAFAAAVRGFFAAGGAGANVTLPHKGAAFALADERSEAATRAGSANVLSPLPGGRLAAHNTDGAGLLRDLTERHGADLRGRDALLLGAGGAARSAAWALLDAGVETLTIVNRTPETADALADAIGEPARVHTRYWDDLANLGSYDLILNATSAGVLGGGLNLPMSLVGARASCYDLAYGAAAVGFIAWATAAGARHAWDGLGMLVEQAAEAFALWHGTRPDTEPVYQALRAG*