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SCNpilot_cont_500_bf_scaffold_692_1

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: comp(2..691)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 260.0
  • Bit_score: 255
  • Evalue 7.10e-65
Transcription termination factor Rho n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 260.0
  • Bit_score: 255
  • Evalue 5.00e-65
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 260.0
  • Bit_score: 246
  • Evalue 9.60e-63

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGTCCGATACCGATAACACCACCCCGAACGACGCCGGCGGCGCCGAGAGCTCGCCCGAGTCGCGTCCGCGCGCCCCGCGCCGCCAGACCCGCGCCCCCAAGCCGGCAGCCGCCGAGACCGCCGCCGCACCGGCCGCGCCGCCCGCCCCGGTGGCGGAGGCGCCCGCCCCGGCGCCGGCCGCGCCGTCCGCGCCCACCGGTGAATTCGGCGGCAACGCCGCGCCCGAGGCGCGCGAACCCGAGCCGGGGCAGAACCCCCAGGCGCCGGGCCAGAACAACGGCAACGGCAACAACGGCAACCGCAACGACCGCGAAGGCCGCGGCCGGCGGCGCCGCCACGAGCGCAACCAGCAACGCCAGCAAGGCGGCGGTGGCGGTGGCGGTGGCGGCAGTGGCGGCGGCGGCAACAACAACCCGCGCTACAACAACCCGCACGGCCTGCCGGTGGACGACGACAACGCCGATCCGGGCGCCGACGACCGCCTGATCAACCTCACCGAACTCAAGCGGATGAAGGCGCCGCAGCTGCTGGCCTTCGCCGAGTCGCTGGGCATCCGCGAGGGCGTGGCGCGCGCGCGCCGCCAGGACGTGATCTTCTCGATCCTGAAGGCCCACGCCCGCTCCGGCGGCGGCATCTGGGCCGAGGGCGTGCTGGAAATCCTGCAGGACGGCTTCGGCTTCATGCGCTCG
PROTEIN sequence
Length: 230
VSDTDNTTPNDAGGAESSPESRPRAPRRQTRAPKPAAAETAAAPAAPPAPVAEAPAPAPAAPSAPTGEFGGNAAPEAREPEPGQNPQAPGQNNGNGNNGNRNDREGRGRRRRHERNQQRQQGGGGGGGGGSGGGGNNNPRYNNPHGLPVDDDNADPGADDRLINLTELKRMKAPQLLAFAESLGIREGVARARRQDVIFSILKAHARSGGGIWAEGVLEILQDGFGFMRS