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SCNpilot_cont_500_bf_scaffold_600_12

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: comp(11953..13050)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 365.0
  • Bit_score: 610
  • Evalue 1.40e-171
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 365.0
  • Bit_score: 610
  • Evalue 9.80e-172
3-isopropylmalate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 365.0
  • Bit_score: 599
  • Evalue 9.30e-169

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
ATGAAGGCACGCATCGTCACCCTGCCCGGCGACGGCGTCGGCACCGAAGTCACCGCCGCGGCGGTGACCGTGCTGCGGGCGGTAGCCACGCATTACGGGCACGAGTTCACGTTCGACGAACAGCTGATCGGCGGCGCCGCGATCGACGCCAGCGGCGAGCCGCTGCCGGCCGCGACGCTGGCCGCGTGCCAGGCCGCGGACGCGGTGCTGCTGGGCGCGGTGGGCGGCCCGAAGTGGTCCGACCCGAACGCGAAGGTACGCCCCGAGCAGGGTCTGCTCGCCCTGCGCGCGGGCCTGGGCGTGTACGCCAACCTGCGCCCGCTCGCCGTGCATCCCGCGCTGGCCGAGCTGTCGCCGCTGAAGAACGGGAAGCTGAAGGACGTCGACGTGCTGTTCGTGCGCGAACTGACCGGCGGCGCCTACTTCGGCGCGAAAACCAGGGGCGCCGACTACGCCACCGACGAATGCAGGTACACCGTGGCCGAGATCGAGCGCGTCGCCCGGCGCGCCTTCGAACTGGCCCGCGCGCGCCGCAGGCACGTCACCTCGGTGGACAAGGCCAACGTGCTGGAGACCTCGCGGCTGTGGCGCAGCACCGTCACGCGCATCGCCGCCGACTACCCCGACGTCGCGCTGGAGCACCAGCTGGTCGATTCGATGGCGATGCTGCTGCTGACCCGCCCGGGCAGCTACGACGTGGTGGTCACCGAGAACCTGTTCGGCGACATCCTCACCGACGAAGCCGCCGCGCTGGCCGGCTCGCTGGGCCTGCTGCCCTCCGCCTCGCTGGGCGATGGCCGCAACGGCCTGTACGAACCGATCCACGGCTCCGCCCCAGACATCGCGGGCAAGGGCGTGGCGAACCCGGTCGGCACCATCCTTTCCACCGCGCTGCTGCTGCGCCACTCGCTGCAGCTGGAGGCCGAGGCGACGGCGGTGGAAGCGGCGGTGGACCACGTGCTGCAGCACGGCCCGCGCAGCCGCGACATCGGCGGCGGCGCTGGCACCGCCGAGGTGCGCGACGCCGTGTTGGCCGCGCTGTCCGAGCACGTCACCGCCCACCGCGGCGATGCCGCAGGAGCACGCGCATGCGGCTGA
PROTEIN sequence
Length: 366
MKARIVTLPGDGVGTEVTAAAVTVLRAVATHYGHEFTFDEQLIGGAAIDASGEPLPAATLAACQAADAVLLGAVGGPKWSDPNAKVRPEQGLLALRAGLGVYANLRPLAVHPALAELSPLKNGKLKDVDVLFVRELTGGAYFGAKTRGADYATDECRYTVAEIERVARRAFELARARRRHVTSVDKANVLETSRLWRSTVTRIAADYPDVALEHQLVDSMAMLLLTRPGSYDVVVTENLFGDILTDEAAALAGSLGLLPSASLGDGRNGLYEPIHGSAPDIAGKGVANPVGTILSTALLLRHSLQLEAEATAVEAAVDHVLQHGPRSRDIGGGAGTAEVRDAVLAALSEHVTAHRGDAAGARACG*