ggKbase home page

SCNpilot_cont_500_bf_scaffold_600_13

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: comp(13196..13780)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 194.0
  • Bit_score: 351
  • Evalue 6.10e-94
isopropylmalate isomerase n=1 Tax=Dyella japonica RepID=UPI00030A4F18 similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 194.0
  • Bit_score: 351
  • Evalue 4.40e-94
  • rbh
3-isopropylmalate dehydratase, small subunit similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 189.0
  • Bit_score: 335
  • Evalue 1.00e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCAGCCCGTCACCCGCATCCACTCGCGCACCGCCGTGCTGCCGGACGAGAACATCGATACCGACCGCATCATCCCCGCGCGCTTCCTCACCACCACCACGCGCGCAGGTCTGGGCAAGCTCTGCTTCAACGACTGGCGCTACCTGCCCGACGGCAGCGACAACCCGGCCTTCCCGCTGAACAAGCCGGAAGCGAAGGGCTGCGCCATCGTGGTGGCCGGCCGCAACTTCGGCTGCGGCTCCTCGCGCGAACACGCGCCGTGGGCGCTGCTGGACTACGGCATCCACGCGGTGCTGTGCAGCGAGATCGCGGACATCTTCCGCAACAACTCGCTGAAGAACGGCCTGCTCGCCATCGTGATCTCCCCCGCCGAGCATCGCTGGCTGCTGGCGAACCCGGGCGTCGAGCTGACCATCGACGTGCAGGGCCAGTACATCGCGCTGCCCGACGGCGGCCGCATCGGCTTCGAGCTGGAGCCGTTCGCACGCCACTGCCTGTTGAACGGCGTCGACCAGCTCGGCTACCTGCTGCAGCACGCGGACGCGATTGAAGCGTTCGAATCACGCGTCGGGAAGGCGGCATGA
PROTEIN sequence
Length: 195
MQPVTRIHSRTAVLPDENIDTDRIIPARFLTTTTRAGLGKLCFNDWRYLPDGSDNPAFPLNKPEAKGCAIVVAGRNFGCGSSREHAPWALLDYGIHAVLCSEIADIFRNNSLKNGLLAIVISPAEHRWLLANPGVELTIDVQGQYIALPDGGRIGFELEPFARHCLLNGVDQLGYLLQHADAIEAFESRVGKAA*