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SCNpilot_cont_500_bf_scaffold_1301_12

Organism: SCNpilot_BF_INOC_Rhodanobacter_69_30

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 12 / 38
Location: 15109..17067

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 673.0
  • Bit_score: 827
  • Evalue 9.80e-237
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 673.0
  • Bit_score: 827
  • Evalue 7.00e-237
recD; exodeoxyribonuclease V, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 681.0
  • Bit_score: 599
  • Evalue 9.70e-169

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
ATGTCGCCTGAAGCCCTGTCCGCCCTGCTCGACCGCGCGCTGGAACAGCAGCGGCTGCGCCCGCTGGACGTGGCGTTCGCGCGCTTCCTCGCCGAACGCGATGCGCGCATCGCGCCCGCGCTGCCGTGGCTGGCCGCGGTGCTCAGCCGCCAGCTCGCCGACGGCCATCTGTGCCTGGACCTGGACCTGCTGCCCGCGCTGGCCGAGGAACAGGACTGGCCCGCCGACTGGCGCGCGCTGGCCGAATCGCTGCGCGAGGGCGGCGCCCTGCGCGTGCCCGACTCGCCCCTGCTCGCCGCGAACAGCGAAGGCGAACCGGGGCACGCGCCGCTGGTGCTGGACGGCACCCGCCTGTACCTGCGCCGCTACTGGAACCACGAGCGCAGCGTGGCGCACGGCATCCTGGCCCGCGTGGCGCGCGCGGCGAATCCGCCGGAGCATCTCGCCGCCGAGCTAGGCCGCCTGTTCCCCGCGACAGCCGAAGCGCCCGACTGGCCGCGCATCGCCTGCGCGCTGGCCGCGCGCGGCGCGTTCGGCGTGATCACCGGCGGCCCCGGCACCGGCAAGACCACCACCGTGGTGCGCCTGCTCGGCCTGCTGCAGACGCTGCAGTTGCGCGAACACGCGCAGCCGCTGCGCATCCGCCTCGCCGCGCCCACCGGCAAGGCTGCGGCCCGGCTCAACGCCTCGATCTCCGCGCAGCTTGCGCGGCTGGACGTGGACGACGCCGTGCGCGCGGCGATCCCCGCGGACGTCGTCACCCTGCACCGCCTGCTGGGCGCGCGGCCGGACACGCGCCGCTTCCGCCACGACCGTCGCAACCCGCTGCACCTGGACGTGCTGGTGATCGACGAAGCCTCGATGATCGACCTGGAAATGATGGCCGCCGTGCTGGCCGCGCTGCCGGAACCGGCCCGGCTGATCCTGCTGGGCGACAAGGACCAGCTGTCCTCGGTGGAAGCCGGCGCGGTGCTGGGCGACCTGTGCCGCCGCGCCGACGCCGGCCACTACGACCACGCCACCGCGCAATGGCTGAAGGCCACCACCGGCGACGACATCGACGCCTTCGTGCAAGGCGACGCGCAGCCGCTGGACCAGCACATCGCGATGCTGCGCACCAGCCACCGCTTCGACGCCCGCAGCGGCATCGGCCGCCTGGCGCAGGCGGTGAACTCGGGCGCCGCGCCCGCCGCGCTCGCGCTGCTGCAAACGCCGACGCCGGACCTCGCCTGGCTGCCCGACGCGGATGCCGCCACGCTGGCCACCGCGGCCATCGACGGTTCGCCCACCCCGCACGACGGAGCCTGCGGCTACCGCCACTACCTGGAATGGCTGCGCGCGCACCGCCCCGCCGCGGACGCCGGCGAGGCCGCGCATGCGGCCTGGGCGCGCGGCGCGCTGGAGGCGTTCAACCGCTTCCAGTTGCTGTGCGCGCTGCGCCGCGGCCCGCACGGCGTGGAAGGCCTGAACCGGCACGTCGCCGCGGCACTGCGCGCGCGCGGCCTGATCGAAGGCGAACACGGCTGGTACGAAGGCCGCCCGGTGCTGCTCACCCGCAACGACTACAGCCTGGGCCTGATGAACGGCGACATCGGCCTGTGCCTGCGCCTGCCATCCACCGACGGCGCGCCCGGCACGCGGCTCGTGGTGGCCTTCCTCGCCACCGCCGATCGCGACGGCGCCACCCGGCTGCGCTTCGTCGCGCCCTCGCGGCTCGCCGACGTGGACACCGCCTGGGCGCTCACCGTGCACAAGTCGCAGGGCTCGGAATTCGACCACACCGCCCTGCTGCTGCCGCCGGACCCGAACGCCGTGCTGACCCGTGAACTGCTCTACACCGGCATCACCCGCGCCCGCCGCCGCTTCACCCTGCTCGGCAGCGCCGCCATCGTCGAACAGGCCGTCGCCCGCCGCACCCGGCGCCACTCGGGGCTGGGGGCGCGGCTGGAGGCGCGATAG
PROTEIN sequence
Length: 653
MSPEALSALLDRALEQQRLRPLDVAFARFLAERDARIAPALPWLAAVLSRQLADGHLCLDLDLLPALAEEQDWPADWRALAESLREGGALRVPDSPLLAANSEGEPGHAPLVLDGTRLYLRRYWNHERSVAHGILARVARAANPPEHLAAELGRLFPATAEAPDWPRIACALAARGAFGVITGGPGTGKTTTVVRLLGLLQTLQLREHAQPLRIRLAAPTGKAAARLNASISAQLARLDVDDAVRAAIPADVVTLHRLLGARPDTRRFRHDRRNPLHLDVLVIDEASMIDLEMMAAVLAALPEPARLILLGDKDQLSSVEAGAVLGDLCRRADAGHYDHATAQWLKATTGDDIDAFVQGDAQPLDQHIAMLRTSHRFDARSGIGRLAQAVNSGAAPAALALLQTPTPDLAWLPDADAATLATAAIDGSPTPHDGACGYRHYLEWLRAHRPAADAGEAAHAAWARGALEAFNRFQLLCALRRGPHGVEGLNRHVAAALRARGLIEGEHGWYEGRPVLLTRNDYSLGLMNGDIGLCLRLPSTDGAPGTRLVVAFLATADRDGATRLRFVAPSRLADVDTAWALTVHKSQGSEFDHTALLLPPDPNAVLTRELLYTGITRARRRFTLLGSAAIVEQAVARRTRRHSGLGARLEAR*