ggKbase home page

SCNpilot_cont_500_bf_scaffold_1288_16

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(18827..21424)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 566.0
  • Bit_score: 893
  • Evalue 1.90e-256
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 660.0
  • Bit_score: 891
  • Evalue 1.60e-256
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVD5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 566.0
  • Bit_score: 893
  • Evalue 1.40e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2598
ATGGCGGCAAAGTCCAAAGTGCCTCCGCCTGTCGATTCCCTCACCCGCGCGAAGGCGAAGGTCGAGCACAAGCGGCTTGCGCTGGAGATCGAGGCGCATGACGCGCGCTATTACCAGGAGGACAGGCCGACGATTTCCGACGCCGCCTACGACGCGCTGCGGCAGCGGCTCGAAGCGATCGAGGCGCGCTTTCCCGAACTCGTTACCGCGAGTTCGCCGACGCAGACCATCGGCGCCGCGCCCGTGCGCGGTTTTGCGAAAGTGCAGCACGCGGTGCCGATGCTGTCGCTGGGCAACGCCTTCAGCGACGAGGAAGTGGCCGAGTTCGTCGAACGCATCCGCCGCTTCCTGAAACTCGGCGCGGACGATATGCTTGCCATCGTCGCGGAGCCGAAGATCGACGGGCTGTCGCTGTCCCTGCGCTACGAACACGGCGAACTGGTGCGCGCGGCGACCCGCGGCGACGGTTTTACCGGCGAGGACGTCACCGCCAATGTGCGCACCATCAAGGATGTGCCGCACCGGCTGAAGGGCCGCGACATTCCCGCGGACTGCGAGCTGCGCGGCGAAGTCTATATGCTGAAAAAGGATTTTCTCGCGCTCAACAGGAAGCAGGAGGAAGCCGGCGACACCGTGTTCGCCAATCCGCGCAATTCGGCCGCCGGCTCGCTACGACAGAAGGATGTTGCGATCACGGCCTCGCGCCCGCTGAAGTTCTTCGCTTATGCCTGGGGCGAGATGACGGATCGTCCGGCCGATACCCAGCACGGCATGCTGGCGTGGCTGGAGAAGGCGGGCTTCGTCGTTAATCCGCTGATCGAATTGTGCCACAGCGTCGACCAGGTGCTGGCATTTTATCGCAAGATCGGCGAGCAGCGCGCCACGCTTGGCTACGACATCGATGGCGTGGTCTACAAGGTCGACCGGCTCGATTGGCAGGAACGTCTCGGCTTCGTGTCGCGAAGTCCGCGCTGGGCGATCGCGCACAAGTTCGCCGCCGAGCAGGCGACCACGATCCTCAAGGGCATCGACATCCAGGTCGGCCGCACCGGCGCGATGACGCCGGTAGCGCGGCTCGAACGAGTTACCGTCGGCGGCGTCGTGGTGCAGAACGCGACGCTGCACAACGAGGATGAGATTGAACGGAAAGATATTCGGATCGGTGACACAGTAATAGTTCAGAGGGCGGGAGATGTTATCCCGCAGGTCGTTTCTGTCGTTAAAAGTAAACCCCGCGGCAAAGAGCGATTCATTTTTCCGGATTATTGTCCCGTTTGCCACAGTCATGCAGTTCGTGAGATAAATCCTCGCAGCGGGAAGGAGGACGCTGTACGCAGGTGTACCGGTGGTTTGATTTGTGCTGCACAGGCAGTTGAACGACTAAAGCATTTTGTTTCAAGGTCTGCGTTTGACATCGAAGGTCTTGGCGAAAAGCAGATCAAAATATTTTTTGAGCGCGGATGGGTTCGGGAGCCGGCGGAGATATTTTCTCTGCCGGAGAGGAATAAAAGAATAGCCCTTCAAGATGAAGAGGGATTTGGTATCACTTCAGTTCAAAATCTCTTCAGGGCGATAGAGGGCAGGAGAAGTATCGAACTCAACAGGTTTATTTTTGCACTCGGCATTCCTGAGATTGGAGTCACAACGGCCAAGCTTTTGGCACGAAGCTTGAAGTCGGCTAGAAACTTTGTATTCGTTTTTTCGAATGGGGTACAATCAATACTTGAGCTTTGGAAAAATGATATCGAGGCAAACGGAAATGTCTGCTTTAAGGGACAGAACTCGAACCGCTTGAAAGAAGTTTTTGATATTTTTCATGAGAAAGTAGACCTCGAACAATATTATATTGCAAAGATAAGATACGTTGATGGCGTCGGGCCTATCACAGCAGCCCGGATTGTGAATCGCACCCATACACTGGTGATGTCTGGTGCTTCGAACGACCTAGAAAGGTGGCAATCAGAACTAAAGAAAATTCCGCGCTTTTCTGAAGCCTCACGCAGGAAGTTTTTTGATGCATTCGACAGTGCCCATTCGGCTTTCGAAGCCACAAAAAAGATTGCGTTTCAATGTGACCTTTCATGGCAATCACTTGAATCAGATTTCGAGCGGCGTGTGACTATTAGTTTTCCTAATACCGAATATGCTCGAATGCTGTCTCACGGATGGCCTATTTTGTCACAGCATATCTGGCGTGTTGTTCACAGAGAGAAAAGCAATTTTGGTGCCTTGCTTTCTATCGACGGATTTGGCGAAACTTCCTTTTATTCAATCGTCCGCTTCTTTATGGAAGAACGGAATATTGGTGTTATTGTAAGACTTCTGGATGAGCTTAAAGTTTTAGAGGGCAATGCTCCAAGCCCCAGAGGTTTATTATCTGGCAAGATTGTAGTCTTCACTGGCTCGCTGACCAAATTTACGCGTAGTGAGGCAGAAGACGCAGCGGAGCGACTAGGCGCAAAAGCTTCTAGCTCGGTCTCTAAGAAAACCGACTATGTCGTCGCCGGCGAAGAAGCAGGCTCCAAGCTTGCCAAGGCCCGCGAACTGGGTGTGACAGTGCTCACTGAAGACGAGTGGCTGAAGTTGATCGAGGAATAG
PROTEIN sequence
Length: 866
MAAKSKVPPPVDSLTRAKAKVEHKRLALEIEAHDARYYQEDRPTISDAAYDALRQRLEAIEARFPELVTASSPTQTIGAAPVRGFAKVQHAVPMLSLGNAFSDEEVAEFVERIRRFLKLGADDMLAIVAEPKIDGLSLSLRYEHGELVRAATRGDGFTGEDVTANVRTIKDVPHRLKGRDIPADCELRGEVYMLKKDFLALNRKQEEAGDTVFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEMTDRPADTQHGMLAWLEKAGFVVNPLIELCHSVDQVLAFYRKIGEQRATLGYDIDGVVYKVDRLDWQERLGFVSRSPRWAIAHKFAAEQATTILKGIDIQVGRTGAMTPVARLERVTVGGVVVQNATLHNEDEIERKDIRIGDTVIVQRAGDVIPQVVSVVKSKPRGKERFIFPDYCPVCHSHAVREINPRSGKEDAVRRCTGGLICAAQAVERLKHFVSRSAFDIEGLGEKQIKIFFERGWVREPAEIFSLPERNKRIALQDEEGFGITSVQNLFRAIEGRRSIELNRFIFALGIPEIGVTTAKLLARSLKSARNFVFVFSNGVQSILELWKNDIEANGNVCFKGQNSNRLKEVFDIFHEKVDLEQYYIAKIRYVDGVGPITAARIVNRTHTLVMSGASNDLERWQSELKKIPRFSEASRRKFFDAFDSAHSAFEATKKIAFQCDLSWQSLESDFERRVTISFPNTEYARMLSHGWPILSQHIWRVVHREKSNFGALLSIDGFGETSFYSIVRFFMEERNIGVIVRLLDELKVLEGNAPSPRGLLSGKIVVFTGSLTKFTRSEAEDAAERLGAKASSSVSKKTDYVVAGEEAGSKLAKARELGVTVLTEDEWLKLIEE*