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SCNpilot_cont_500_bf_scaffold_1196_13

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 13183..13689

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhizobium radiobacter RepID=UPI000370ECC6 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 166.0
  • Bit_score: 197
  • Evalue 1.20e-47
Putative RNA polymerase sigma factor FecI {ECO:0000313|EMBL:CEJ14980.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 168.0
  • Bit_score: 247
  • Evalue 1.10e-62
RNA polymerase sigma factor protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 166.0
  • Bit_score: 196
  • Evalue 4.90e-48

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 507
ATGTTCGGGACGTTAGTGCAGGAATTGCAGCGTTCGGAGGAAGGTCGGCTCCGGCGTTTTTTTATGCGCCGGTTTCGCAACGCCACCGAGGCATCCGACGCGACGCAGGAGACTTTCCTGCGCATGCTCGATGCGCCGCCGAAGACCATCATCGAAAATCCGCAAGCCTATCTGTTCCAGATCGCGAAGTCAGTCGCCCGAGTCACGTCAGCCCGCCTCGCGGCCGATGCCGAGCTGTTTCTGCCTGCGATCGTGGGCGAGAATCAGGCGACGGATGCTCCGGATCAGGAACGGGTCGTCATCGGTCGCCAAAGCCTGATTCTGCTGGCGAAAGCGATCGAGAAACTGCCGAACCGCTGCCAGGAAGTCTTTATCCTAAGCCGCCTGCATGGCATGTCGAATGGCGAGATCGCCGACCGGCTCGGAATTTCGCGCAACATGGTCGAGAAGCATATCATCAAGGCCTTGATCCGCTGCCGGAAGGTGCGCTCCGAGATTTGTTTCTAA
PROTEIN sequence
Length: 169
MFGTLVQELQRSEEGRLRRFFMRRFRNATEASDATQETFLRMLDAPPKTIIENPQAYLFQIAKSVARVTSARLAADAELFLPAIVGENQATDAPDQERVVIGRQSLILLAKAIEKLPNRCQEVFILSRLHGMSNGEIADRLGISRNMVEKHIIKALIRCRKVRSEICF*