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SCNpilot_cont_500_bf_scaffold_1678_6

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 6107..7186

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU68_METTR similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 327.0
  • Bit_score: 312
  • Evalue 7.10e-82
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EUB98242.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 327.0
  • Bit_score: 272
  • Evalue 1.10e-69
fecR; iron siderophore sensor protein; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 336.0
  • Bit_score: 164
  • Evalue 7.50e-38

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
GTGCCGGAACCGCCGGACCATTTTCATTTAGAAACTGCCGCTTCGCGCGTCTTTAGCGTAGAAGTCTGTTGGGGCATCGGCAATACTGCGATACGCCAGATGAGAGAAGGACAAGCGCCAGCCATCAGTGACCGCGCCCGCAAGGAAGCGCGCGACTGGGTCGTGCGCCTGTCATCCGGCGCGGTGTCGGAGGCCGAGCTTGCGCAGTTCAAGGCCTGGCGGGCGGTCTCCGGTCATGCGCGCGCCTTCGCCGAGGAACGGCGGTTCTGGCGGCAGCTCGGCGGCCTTGACGGGAGCCGGGCGTCTGCTCCCACGGGAATTGCAGCCCGGCCCCGCGTCGTCAGTCGTCGCGCCGCTCTCGCCGGGGGCGGGGCGCTCGCCGCATCAATCGCGGGCCTTATAGTCGCGCCAAGGATCAAGCTGCTGTGGGAGGCGGATTACCGCACGGCCATCGGCGAACAGAAGCGGGTCACCCTGCCGGATGGCGCGGTCGCGACACTGAACACCGATAGCGCGATCGCGCTGGATTATCGCCCGGACCTGCGCCTGGTCTATCTGTTGCGTGGCGAGGCTTTTTTTGAGGTGAAGCCGCAGGGAGGGCGGGAGCTTCGTGTCGCCGCGTTCGACGGGGTGACGCGCATGACCGAGGCGGCCTGCGCGGTCAGGCTCACAGACGATCAGACGATCGTCACCGTTGCAGCGGGACAGGCGGACGTCGTCTGTCCCGCTGCCGCCGCTGCGACGACGCCGGATCCCGCCGCGATCGCCGTCCGCGCCGCCCAGGCGACCAGCTATATGCGCGGTCAGGCGCCGGCGCCCGCCACCGCCGTCGACACGCAGACCGCACTGGCATGGCGGTCGGGCCGGATCATTTTCGACGGGCGCACCTTCGCGCACGCTCTCTCCGATCTCGAACGCTATGTGCCGGAACGGATCATCATGACGGACCGAAGCCATGCGGGAGAACGCGTCAGCGGCATCTTTTCGGTCCATCAGGCCCAGGCGGCGATCGAGGCGCTGGCGCAGACGCAAAATCTCGCTGTGCACCGTATCCCCGGCGTGATGATCGTTATCAGCTAG
PROTEIN sequence
Length: 360
VPEPPDHFHLETAASRVFSVEVCWGIGNTAIRQMREGQAPAISDRARKEARDWVVRLSSGAVSEAELAQFKAWRAVSGHARAFAEERRFWRQLGGLDGSRASAPTGIAARPRVVSRRAALAGGGALAASIAGLIVAPRIKLLWEADYRTAIGEQKRVTLPDGAVATLNTDSAIALDYRPDLRLVYLLRGEAFFEVKPQGGRELRVAAFDGVTRMTEAACAVRLTDDQTIVTVAAGQADVVCPAAAAATTPDPAAIAVRAAQATSYMRGQAPAPATAVDTQTALAWRSGRIIFDGRTFAHALSDLERYVPERIIMTDRSHAGERVSGIFSVHQAQAAIEALAQTQNLAVHRIPGVMIVIS*