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SCNpilot_cont_500_bf_scaffold_11865_5

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 35 / 55 BSCG 37 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 4588..5460

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 280.0
  • Bit_score: 308
  • Evalue 2.60e-81
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module {ECO:0000313|EMBL:ABA03620.1}; EC=6.5.1.1 {ECO:0000313|EMBL:ABA03620.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 280.0
  • Bit_score: 308
  • Evalue 1.20e-80
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS36_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 297.0
  • Bit_score: 308
  • Evalue 8.30e-81

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
GTGTCCTCCCGAAAGCTCAGCACCTATATCAAGAAGCGCGACTTCTCGAAAACCACAGAGCCGAGCGGCAAAGCGCGCGTCGCGGCTTCAAACCAACGGCGCTTCGTGATTCAGAAGCACGCCGCCACGCGGCTGCATTACGATTTTCGTCTCGAATATGACGGCGTGTTCAAGTCCTGGGCGGTGACGCGCGGGCCCTCCCTCGATCCGGGCGAGAAGCGGCTCGCGGTGGAGGTCGAGGATCATCCGCTCGACTACGGCGACTTCGAGGGCACCATCCCCAAGGGCCAGTACGGCGGCGGCACGGTGGAGATCTGGGACCGCGGCTACTGGTACGCCGAAGACCCGGCGAAAGGTCTCGCCAAGGGTGACCTCAAATTCGCGCTGATGGGTGAGAAACTCAAGGGCGAGTGGGTGCTGGTGCGCATGAAGCACGACCGCAGCGGCGGCAAGCGCACCAACTGGCTGCTGATCAAGCAAGCAGGACCGCTCTGTCGCGTCGGGCCGCACGCTCGAACAGATCGCGCAAGGCCAGGGCAAGGCGCCGGAGCCTTTCATGATGACCGCGCGAACAGCCGGTTCCGATGCGGTCTGGAATTCCAACAAAGGCATTGCAGCGGAGGCGCGCGCGACAAAGACAAGCGCCAAACCGGCGTCAACGCGCAAGCGAGTGCCGAAAAAAGCCACGACACGAGCGAGCAAGACACGAGCGAGCCGGGCACAAACGAACGCCCGCGCCATCAAGGACGATATGCCCGACTTCACCGGGTTTCAGCTATGCGAAATTTCGGCGCGTCCGCCAACGGCGGAAGGCTGGGTGCACGAGATCAAGTTCGACGGTTACCGCATCCAGATGCGGATCGAGAACGGTGA
PROTEIN sequence
Length: 291
VSSRKLSTYIKKRDFSKTTEPSGKARVAASNQRRFVIQKHAATRLHYDFRLEYDGVFKSWAVTRGPSLDPGEKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVEIWDRGYWYAEDPAKGLAKGDLKFALMGEKLKGEWVLVRMKHDRSGGKRTNWLLIKQAGPLCRVGPHARTDRARPGQGAGAFHDDRANSRFRCGLEFQQRHCSGGARDKDKRQTGVNAQASAEKSHDTSEQDTSEPGTNERPRHQGRYARLHRVSAMRNFGASANGGRLGARDQVRRLPHPDADRER*