ggKbase home page

SCNpilot_cont_500_bf_scaffold_1754_15

Organism: SCNPILOT_CONT_500_P_Leifsonia_70_8_8

partial RP 35 / 55 MC: 1 BSCG 36 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(15477..16724)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B34195 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 422.0
  • Bit_score: 356
  • Evalue 4.90e-95
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK97564.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 400.0
  • Bit_score: 448
  • Evalue 1.00e-122
putative ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 418.0
  • Bit_score: 306
  • Evalue 1.10e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
GTGACCACCGCCATCGAGCGCGCATACCGCACCGAGGCGGCGCGCATCCTGGGTGCCGTCGCACGATCGGTCGGCGACCTCCAGCTCGCGGAGGACGCGGTGCAGGAGGCGTTCGCGCGCGCCGTCGCCGAGGCGGCCGCCGGACGTGAGCCCGCGAACCCCGCGGCGTGGATCACCACGGTCGCGCGCCGGATCGCCGTCGATCTGCGGCGCCGCGAGGCGACGGCGATGCGCGCCCTCCCCGCGCTGGCCGCCGAGGAGGCCGGACGGGAGGCGGCGCAGGCGGCGGAGGCCGACATGCTGAGGGACGACGTGTTCACCGGGGACGAGCGGCTCGAGCTCATCCTGCTGGTGTGCCACCCGGAGGTGGCGGAGGAGACGCGGGTCGCGCTCGCCCTGCGGTTCGTGTGCGGGGTGCCGACGGCGCAGGTCGCCGAGGTGTTCCTGGTGCCCGAGCCGACGATGGCGGCACGCCTGACCCGGGCGAAGAAACGCATCCACGACTCGCGGCTGCGCTTCGCGGCCGACGATCCTGGCGACCTCTCCGCGCGGCTGCCCGACGCGCTCACGACGGTGTACCTGCTCTACACGATCGGCCACGCGCGCGCCGACGGCCGGCTGCGGACGGACGCGATCGAGCTGGCACGGGATGCGCGGCGCATCCGACCCGCCGACCCGGAGGCCGCCGGACTGCTCGCGCTGCTGCTGCTGACCGAGGCGCGTCAGACGACGCGGCTGTCGGAGCTGGACGAGTTCGTCACCCTCGCGGAGGCGGACCGCTCGCGCTGGGACCGCGCGCTGCTCGACGAGGGGGAGCGCCTGGCGACGGACGCTCTGACCGGGAGCCGCGGGGAGCCGCCGGGGCGGTTCGCGCTGCAGGCCGCCGTCGCCGGGCTGCACGGGATCGCGCCGACGTGGACGGCGACCGACTGGCCGGCCATCGCACGCCTGTATGACGGGCTGGTGCAGGTCTGGCCGTCGGCCACCGCGCAGCTCGGGCGGATCGTCGCCCGGGGCTACAGTCCCGACGTCGGGCCGGAGGCCGCGCTCACCGAACTGGCGACACGGCCCGAGCTGTTCGAGGGGATCGTCGCCGCGCAGGCGCTCGCCGTGCGAGCGGACCTGTTGCGAGCGGCGGGGGAGACGTCGAGCGCCGCGGACGCCTACGCGGAGGCGCTGGAGGCGACGACGGACGAGCGCATCCGGCGGTTCCTTCGCCGCAGGCTCGCGGAGCAGCGGGACGCCTGA
PROTEIN sequence
Length: 416
VTTAIERAYRTEAARILGAVARSVGDLQLAEDAVQEAFARAVAEAAAGREPANPAAWITTVARRIAVDLRRREATAMRALPALAAEEAGREAAQAAEADMLRDDVFTGDERLELILLVCHPEVAEETRVALALRFVCGVPTAQVAEVFLVPEPTMAARLTRAKKRIHDSRLRFAADDPGDLSARLPDALTTVYLLYTIGHARADGRLRTDAIELARDARRIRPADPEAAGLLALLLLTEARQTTRLSELDEFVTLAEADRSRWDRALLDEGERLATDALTGSRGEPPGRFALQAAVAGLHGIAPTWTATDWPAIARLYDGLVQVWPSATAQLGRIVARGYSPDVGPEAALTELATRPELFEGIVAAQALAVRADLLRAAGETSSAADAYAEALEATTDERIRRFLRRRLAEQRDA*