ggKbase home page

SCNpilot_cont_500_bf_scaffold_750_18

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: comp(20239..20985)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:KFC68135.1}; EC=5.4.99.- {ECO:0000313|EMBL:KFC68135.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 228.0
  • Bit_score: 402
  • Evalue 3.90e-109
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 242.0
  • Bit_score: 327
  • Evalue 3.50e-87
  • rbh
Pseudouridine synthase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDT3_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 242.0
  • Bit_score: 327
  • Evalue 1.10e-86
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGCTCAGCCGGTTCAACCAGAAAATTCGCAGCCGCCACCGCAGATCGACCCCGCATTGCCGGTGCCGCTGCTCTATCGCGACGCCATGATGCTCGTCATCGACAAGCCTGCAGGCCTGCCGGTCCATCGCGGCCCGCAGGCCAAGCGCCGCGAAGTACCTGTCCTGACCGACCATCTCGATGCGCTGCGTTTCGGCCTGCCGCGCCGGCCGGAACTGGCGCATCGCCTCGACAAGGACACCTCCGGCTGCCTCGTGCTCGGTCGTCATCCTCGCGCCATGGCCGAGCTCAACCAGATGTTTCGCGATGGCCGCATCGGCAAGACCTACTGGGCGATCGTGCAGGGCGCACCCGCGGACGACGAAGGCCTGATCGATCTGCCGCTGGCGCGCCGCTCCCCGGACCGCGGCTGGTGGATGAAGGTCGACCCTGCCGGCCTGCCCTCGCAGACAGGCTACCGCGTGCTGGGTCGCGGGCAGGGGGCCGAGGGGCCGCTCGCCTGGCTCGCCCTGGAGCCGCTGACCGGGCGCACCCATCAATTGCGGGTTCACTGCCAGGCTTCCGGCTGGCCGATGCTCGGCGACGAGATCTACGGCGCCGCGCCGCGCGAGGGCGGCCCCGGGCTCCAGCTTCATGCTCGTGCGATCACGGTGCCGCTCTATCGCAAGCGCGAGCCGATCCATGTCGAGGCGCCGCCGCCGCCGCACATGCTGGCGGCGCTCAAGGCTTGCGGGTGGACTGGCTGA
PROTEIN sequence
Length: 249
MAQPVQPENSQPPPQIDPALPVPLLYRDAMMLVIDKPAGLPVHRGPQAKRREVPVLTDHLDALRFGLPRRPELAHRLDKDTSGCLVLGRHPRAMAELNQMFRDGRIGKTYWAIVQGAPADDEGLIDLPLARRSPDRGWWMKVDPAGLPSQTGYRVLGRGQGAEGPLAWLALEPLTGRTHQLRVHCQASGWPMLGDEIYGAAPREGGPGLQLHARAITVPLYRKREPIHVEAPPPPHMLAALKACGWTG*