ggKbase home page

SCNpilot_cont_500_bf_scaffold_837_15

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_65_15

near complete RP 49 / 55 BSCG 48 / 51 MC: 2 ASCG 12 / 38
Location: 13378..14157

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQV2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 242.0
  • Bit_score: 191
  • Evalue 1.00e-45
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EIG62158.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 242.0
  • Bit_score: 191
  • Evalue 1.40e-45
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 268.0
  • Bit_score: 140
  • Evalue 8.40e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. WSM1253 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCAGCTTCTGGCCATTCAGCAGGCCATGGCCGCGAGCAGTATCCTGGCGACGATGCCGCAGGTCATCGAGAGCGTCGGCCGGCCCGGTTTCTCGGCCGGGCTGTTCGATATCGCACGCCGCTTCACCGGCACGGAGATCGTCACCGCCTTCGTGACGGCGGCGGATGGTGCCGTCCACACGCTTCTCGCCGAGAACCGGCAGGAGCCCGGTCGGGCAGCGCTCGATGTCGCGCGCCGCTACGTCTCCCGCCACTGGCGCGCCGACCCGGCCAACACGGTCGAGCTCGACGGCACCGGCAGCCGCGATTGCTGGGGCGTCAGGATGCGGGCGAGCGACATCGCCAACCCGTCCTATCGCAGCGAATGCTATTTTTCGGTCGGGCTGTCGGAGCGCTTCTCGCTGATCCAGCGCCGCAGCGGCGACACGATGCGGCTCAGCATCTATCGCCGCCGCAAGGAGAGCTTCAGCGACCAGGAGATCGCGCATCTCGTCGAGAGCGCGCCCTTGCTGATGGCCGCCCTCTGGCGCCATTACGAAGCGGAGGAGCCGGCCAGAGACGGCACGCTTCCGGCGTTTCGGGCACGGCTCGCTGCGGTCGCGCCCAGCCTGTCCGCGCGGGAGCGGGACGTCTGCGCGCTGATCGCGAGCGGGTTGACCTCGGAAGGTATCGCGCTCGAGCTCGGCGTCGGCATCAACACCGTGCTCACCTATCGCAAGCGCGCCTATGCCAGGCTCGGCATTTCCTCGCAGAACGAGCTGATGCGCATCCTGATGTGA
PROTEIN sequence
Length: 260
MQLLAIQQAMAASSILATMPQVIESVGRPGFSAGLFDIARRFTGTEIVTAFVTAADGAVHTLLAENRQEPGRAALDVARRYVSRHWRADPANTVELDGTGSRDCWGVRMRASDIANPSYRSECYFSVGLSERFSLIQRRSGDTMRLSIYRRRKESFSDQEIAHLVESAPLLMAALWRHYEAEEPARDGTLPAFRARLAAVAPSLSARERDVCALIASGLTSEGIALELGVGINTVLTYRKRAYARLGISSQNELMRILM*