ggKbase home page

SCNpilot_cont_500_bf_scaffold_411_22

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 21329..24211

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion ATPase, ClpV1 family n=1 Tax=Variovorax sp. CF313 RepID=J3CNK3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 963.0
  • Bit_score: 1324
  • Evalue 0.0
  • rbh
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EJL75071.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 963.0
  • Bit_score: 1324
  • Evalue 0.0
type VI secretion ATPase, clpv1 family; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 963.0
  • Bit_score: 1322
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2883
ATGAGCGAAATCAGCCGCGTGGCGCTATTCGGCAAACTGAACAGCCTCGCCTACAAGGCAATCGAAGGTGGCACCGTTTTCTGCAAGCTGCGCGGTAATCCTTATGTCGAGCTGGAACACTGGCTGCAGCAGATCCTGGCGAACCAGGATTCAGATCTCCACCGTATCATCAGGCATTTCGAAATCGACAGTTCCCGGCTTGCAAAGGATCTGACTGATGCGCTCGACCGCTTGCCGCGCGGCGCCACATCCATCTCCGATCTTTCCGAGCGTATCGAATATGCGGTGGAGCGCGGGTGGGTCTATGGGACCCTGATGTTCGGCGAAGCGCAGGTGAGAACCGGGCATCTCCTGGTGGGCATGCTCAAGACCTCCAGCCTGAGGAATGCCTTGTTCGGCATTTCGCGGCAGTTCGATCGTATTCGTCCGGATACGCTGGCGGATGAGTTCTCCAGAATCGTTGCCGGCTCGCCAGAGGAGCAATTGCGCGCTACGGATACCTCAGCTGCCGGCCCGGGAGAGGCGAGTAGCGCGCTGGCGCCGGCGCAAATGGGCAGGCAGGAGGCACTGAAGAAGTTTTCCGTGGACCTGATAGCGCGTGCGCGCAAGGGCGAGATCGACCCCGTGACCGGGCGCGATGATGAAATCCGTCAGATTGTCGATATCCTCATGCGCCGCCGGCAGAATAATCCCATCCTCACCGGAGAAGCGGGTGTGGGCAAGACTGCGGTGGTCGAAGGCTTCGCCCTGCGTATCGCGAAGGGCGACGTGCCTCCGCCGTTAAAGGATGTCTCCCTGCTGGCTCTGGACATCGGGTTGCTGCAGGCGGGCGCCAGCATGAAGGGGGAATTCGAAAACCGGCTGCGCCAGGTGATCGACGAGGTGCAGGCTTCGCCCCGGCCCATCATCCTGTTCATCGACGAGGCCCACACCCTCATCGGCGCCGGCGGGCCCGCTGGAACCGGCGACGCCGCCAACCTGTTGAAGCCAGCCCTCGCGCGCGGCACGCTGCGCACCATCGGTGCCACCACCTGGGCGGAATACCGCAGGTATTTCGAGAAGGACCCGGCGCTCACGCGGCGTTTCCAGGTCGTGCAGATACTGGAGCCCTCGGAGGAAAAGGCGATACTAATGGTGCGCGGGGTGGCTTCGACGCTGGAAAAGCATCATCGCGTGCAGTTGCTCGACGTGGCGCTGGAAGCTGCCGTCAAGCTGTCCCATCGCTACATCCCCGCGCGCCAGCTTCCGGACAAGGCCGTGAGCCTGCTCGACACCGCATGCGCGCGCGTTGCCATCAGCCAGTATGCCACTCCCGCGGAAGTCGAGGATTGCCAGCGCCGCCTGGAGGCATTGGCGACAGAACTGGAAATCATCGGCCGGGAAGAAGAGGTGGGCTTCAACGTAGGCCCGAGGCGCGTTGATGTGGAACAGAAGCAGGAAGCGGAAAAGGTACGCCTGGGGACTCTCAAGGCCCGCTGGCAGGAAGAAAAAGGATTGGTTGACCGCATACTCGAACTGCGCGGAAAGCTGCGCGCAGGCGGCAAGCCGGTGGATGCGGCAGATGTGAAAGCGCAGGATATTCCCGTTGCGGGTTCGAATACCGGCGGCACCGGTACACAGGGTACGTTGGCGGAAAATTCCGGTGCCAGCTCCACGGGCACATCCGCAACGGGCGAGAACAATGTGACCGCTACCCAACCAACGGAAGGCTCCGGTAGAAAAGCAGCAACACCGTCTCCAGTTGATACCGCTGGCGCCGTCAAAGCTGCCGATGCCGCGCTTGCTCCGGAAGAGCGCCAGCAGTTGCTGGCGGAATTGAGCGAACTCCAGGTGAAGCTGGATACGCTTCAGGGGGAGTCGCCCCTCATCATGCCGACGGTGGATGCACAGGCGGTTTCCTCGGTGGTGGCCGACTGGACCGGCATCCCGGTGGGACGTATGGTGAAAAACGAGGTGGAAGCCGTGCTCAAGCTGGCGGATACGCTGAACCAGCGCATCATAGGCCAGCGCCATGCGCTGGAGATGATTGCCCGCCGCATCCAGACTTCGCGGGCGAAGCTCGATAATCCGAATAAGCCCATCGGCGTATTCATGCTCTGCGGCCCTTCCGGCGTGGGGAAGACCGAGACCGCGCTTGCGCTGGCCGAGTCGCTTTATGGCGGCGAGCAGAATGTCATCACCATCAACATGAGCGAGTTCCAGGAAGCCCACACCGTTTCCACCTTGAAGGGCGCGCCGCCCGGCTATGTGGGCTATGGCGAAGGCGGCGTGCTGACCGAAGCGGTGCGGCGGCGGCCCTACAGCGTGGTGCTGTTGGATGAAGTGGAAAAAGCGCACGCTGACGTGCATGAGATTTTTTTCCAGGTATTCGACAAGGGCTGGATGGAAGACGGCGAAGGCAGGCACATCAACTTCCGCAATACGATCATCCTGCTTACCACCAATGTCGGCACCGACCTCATCATGGGCATGTGCCGCGATCCCGAACTGATGCCGGACTCCCAATCGCTGGCGACGGCACTGCGCGCACCGCTGCTCAAGGTCTTCCCCCCGGCCTTGCTCGGCCGGTTGGTGACCATTCCTTATTACCCGCTGAGCGACGACATGATCAGCGCCATCGCGCGGTTGCAGCTCAGCCGGATCAGCAAGCGCATCTTGGAGAACCACAGGATTCCATTCGGCTACGACGACGACACGGTCAGGCTCATCGTCAGCCGCTGCACCGAACTCGAAAGTGGGGGCCGCATGATCGATGCGATTCTCACCAACACCGTGCTGCCTCGCATCAGCGAGGAGTTTCTCAAGCGCATGGTGGAAGGCAAGCCCGTGGCGCGGGTGCAGGTGAGCGTGAAGGATGGAGAATTCGGGTATGGGTTCGAGTGA
PROTEIN sequence
Length: 961
MSEISRVALFGKLNSLAYKAIEGGTVFCKLRGNPYVELEHWLQQILANQDSDLHRIIRHFEIDSSRLAKDLTDALDRLPRGATSISDLSERIEYAVERGWVYGTLMFGEAQVRTGHLLVGMLKTSSLRNALFGISRQFDRIRPDTLADEFSRIVAGSPEEQLRATDTSAAGPGEASSALAPAQMGRQEALKKFSVDLIARARKGEIDPVTGRDDEIRQIVDILMRRRQNNPILTGEAGVGKTAVVEGFALRIAKGDVPPPLKDVSLLALDIGLLQAGASMKGEFENRLRQVIDEVQASPRPIILFIDEAHTLIGAGGPAGTGDAANLLKPALARGTLRTIGATTWAEYRRYFEKDPALTRRFQVVQILEPSEEKAILMVRGVASTLEKHHRVQLLDVALEAAVKLSHRYIPARQLPDKAVSLLDTACARVAISQYATPAEVEDCQRRLEALATELEIIGREEEVGFNVGPRRVDVEQKQEAEKVRLGTLKARWQEEKGLVDRILELRGKLRAGGKPVDAADVKAQDIPVAGSNTGGTGTQGTLAENSGASSTGTSATGENNVTATQPTEGSGRKAATPSPVDTAGAVKAADAALAPEERQQLLAELSELQVKLDTLQGESPLIMPTVDAQAVSSVVADWTGIPVGRMVKNEVEAVLKLADTLNQRIIGQRHALEMIARRIQTSRAKLDNPNKPIGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHADVHEIFFQVFDKGWMEDGEGRHINFRNTIILLTTNVGTDLIMGMCRDPELMPDSQSLATALRAPLLKVFPPALLGRLVTIPYYPLSDDMISAIARLQLSRISKRILENHRIPFGYDDDTVRLIVSRCTELESGGRMIDAILTNTVLPRISEEFLKRMVEGKPVARVQVSVKDGEFGYGFE*