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SCNpilot_cont_500_bf_scaffold_577_15

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(15494..15862)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV01_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 118.0
  • Bit_score: 200
  • Evalue 1.30e-48
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 118.0
  • Bit_score: 200
  • Evalue 4.20e-49
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 213
  • Evalue 1.30e-52

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGAAGTACACCGTGCACACCGTTTTTTCGACTTCCCGTCTTTCTGTAAATCCGCATCTGCGACTGGCGTTGCACGTTGCCGTGCTCACTGCACTGATGCTGGGCCTGGCAACGACTGCCCACGCGGCGGGCTCCAGCATGCCCTGGGAAGGGCCGCTGCAATCCATCCTTGAATCGATCCAGGGGCCGGTGGCCCGGATCGTCGCGGTAATCATCATCATTTCCACTGGCCTGGCGCTGGCCTTCGGCGATACGTCGGGTGGTTTTCGCAAGCTGATCCAGATTGTGTTCGGCTTGTCGATCGCGTTCGCCGCGTCCTCGTTTTTTCTGTCGTTCTTCTCGTTCTCGGGTGGAGCGGTGGTCGCATGA
PROTEIN sequence
Length: 123
MKYTVHTVFSTSRLSVNPHLRLALHVAVLTALMLGLATTAHAAGSSMPWEGPLQSILESIQGPVARIVAVIIIISTGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVVA*