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SCNpilot_cont_500_bf_scaffold_3107_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 8295..12524

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2642
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 999.99
  • Bit_score: 2621
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR75_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 999.99
  • Bit_score: 2637
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4230
ATGAAAGCACTGCTTGATTTATTCAAACAGGTTACCCAGAAGGAAGAATTCGACTCGATCAAGATCGGACTGGCTTCTCCCGAAAAAATACGTTCCTGGTCTTATGGCGAGGTGAAGAAACCGGAAACCATCAATTACCGCACGTTCAAGCCGGAGCGGGATGGCCTGTTCTGCGCCAAGATTTTTGGCCCCGTCAAGGATTACGAGTGCCTGTGCGGGAAGTATAAACGCCTGAAGCACCGTGGCGTGATCTGCGAGAAATGCGGCGTCGAGGTAACACTGGCCAAGGTTCGACGCGAGCGCATGGGCCATATAGAACTCGCATCCCCCGTAGCGCATATCTGGTTCCTCAAGTCCCTGCCATCGCGTCTTGGCATGGTGCTGGACATGACGCTCCGGGACATCGAACGCGTGCTCTATTTCGAGGCCTACGTGGTTACCGACCCGGGCATGACGCCGCTCAACCGGTGCCAACTGCTTACAGACGACGATTATCGCGCCAAAACGGAGGAGTACGGAGATGATTTTCGCGCCAGCATGGGAGCGGAAGGAATTCGTGACTTGCTGGCAAACCTGAACATTCGCGTCGAAATCGATAATCTTCGGCGAGAAATGGGAACGACAGGTTCGGAAACCAAGATGAAGAAGATCTCCAAGCGCCTGAAGGTGCTGGAGGCGTTCAATAAATCCGGCATCAAGCCGGAATGGATGGTGTTGGCGGTCTTGCCGGTCCTGCCACCCGAATTACGCCCGCTGGTTCCCCTGGATGGAGGACGTTTCGCCACCTCGGACCTGAACGACCTGTACCGCCGCGTCATCAATCGCAACAACCGGCTGAAGCGTCTGCTCGAGTTGAAGGCTCCAGAAATCATTGTGCGCAATGAAAAGCGCATGTTGCAGGAAGCGGTCGATTCGTTGCTGGATAACGGCCGCCGGGGCAAGGCCATGACGGGCGCCAACAAGCGGCCGCTGAAATCCCTGGCCGACATGATCAAGGGCAAGGGAGGGCGGTTCCGTCAAAATCTGCTCGGGAAACGCGTCGATTACTCCGGCCGGTCCGTGATCGTGGTTGGGCCGCAGCTCAAATTGCATCAATGCGGCCTGCCAAAGAAAATGGCGCTGGAATTGTTCAAGCCGTTCATTTTCAACAAGCTCGAAATCATGGGTATTGCCAGCACCATAAAGGCTGCGAAGCGCGAGGTGGAGAATGAAAGCCCTGTAGTGTGGGATATTCTCGAGGATGTGATTCGCGAACACCCGGTGATGCTGAACCGCGCGCCTACGCTGCATCGGCTTGGCATCCAGGCATTCGAGCCGGTTTTGATAGAAGGCAAGGCCATTCAGCTTCATCCTCTGGTATGCGCAGCTTTCAATGCCGACTTTGACGGTGACCAGATGGCAGTCCATGTCCCGCTCTCGCTGGAAGCGCAAATGGAATGCCGTACGTTGATGATGTCAACCAATAACGTGCTGTCGCCGGCCAACGGCGAGCCGATCATCGTGCCATCGCAGGATATCGTTCTTGGCTTGTACTACACCACGCGCGAGAAGGTCAATGCGCGCGGCGAAGGCATGATTTTCTCCAACATCGGCGAAGTATCGAGAGCTTACGAAAGCCGCATAATCGAATTGAACGCCCGGATTACCGTGCGCATCAAGGAGTATGAGATAGACCGCGATGGCGAGCGCAGCGAAAAGACGACTCGTTACGAGACGACGGTGGGGCGGGCTTTGCTCTCCGAAATCCTTCCAACCGGGCTGCCATTCCCATTGATCAACAAGGTACTCAAGAAGAAGGAAATTTCCAAGCTTATCAATGCCAGTTTCCGGCGCTGCGGGCTGCGCGAGACGGTCATTTTTGCCGACAAGCTGATGTACTCCGGCTTCAGCTATGCCACGCGTGCCGGCATTTCGATCTGTCTGGACGACATGCTCACCCCTGCGCAGAAAGATGCCATCATCAATGCGTCGGAGAAGGAAGTGCAGGAGATCGAGGTCCAGTATACCTCGGGGCTCGTCACGCAAGGGGAGCGCTACAACAAAGTGGTGGACATCTGGGGCCGGGCCGGTGATCAGGTTGCGAAGGCCATGATGGATCAGCTCGGTGTCGAGCCGATAGTTGATCCGGCCACGCGGGAGGTCAAGACGGATAACAAAGGCGAGCCGCTGACGCAGGAGTCCTTTAATTCCATCTACATGATGGCGGACTCGGGCGCGCGCGGGTCCGCCGCCCAGATTCGGCAGTTGGCAGGGATGCGCGGTCTGATGGCAAAGCCCGATGGCTCGATCATCGAGACGCCTATCACCGCGAATTTCCGTGAAGGGTTGAACGTGCTTCAGTATTTTATTTCCACCCACGGCGCCCGCAAGGGTCTTGCCGATACGGCATTGAAAACGGCAAATTCCGGTTATCTTACCCGCCGTCTGGTCGATGTCACCCAGGATCTCGTGGTAACCCAGGAAGACTGCGGCACCAGTAACGGCGTTGTCATGAAAGCTCTGGTTGAAGGCGGTGAAGTCATTGAAGCCCTGCGAGAGCGGATACTCGGGCGGGTAGTGGCCAACGACATCGTCAATCCCGAGCATCAGGCAGTGATTTATCCTGCGGGCATCCTCCTGGATGAAAACGCGGTGGATACCATTGAATCTCTGGGAATCGATGAAGTCAAGGTAAGGACTCCCCTTACCTGCGAAACGCGCTATGGCCTTTGCGCCAAGTGCTATGGAAGGGATCTGGGGCGTGGAACGCCGGTGAATGTGGGTGAGGCCGTGGGCGTCATAGCTGCTCAATCCATTGGCGAGCCCGGCACCCAACTTACGATGAGAACATTCCACATCGGAGGCGCCGCTTCCCGAACGGCGGTGGCCAGCCAGGTGGAAAGCAAATCCAACGGTGTCGTGCACTATTCTCCTACCATGCGCTATGTGACCAACGCCCGCAATGAACTGGTCGCGATTTCCCGTAGCGGCGAGGTAGTGATACATGATGACAACGGCCGGGAGCGGGAGCGTCACAAGGCGCCTTATGGAGCAACCCTGCTGATACGCGATGGCGAGGTTGTCCGGGCAGGGCAGGTGCTGGCCGCCTGGGACCCGCATACTCGTCCCATTATCACCGAGTACGCGGGCAAGGTTCGCTTCGAGAACGTGGAAGAAGGCGTTACCGTGGCCAAGCAGATAGACGAGGTGACTGGCTTGTCCACGCTTGTGGTAATCGATCCGAAACGGCGCGGCGTGGCTCAAACCAAGGGCCTGCGTCCGATGGTGAAGCTGCTGGACGAGGATGACAAGGAAGTAAGGCTGGCCGGCGGTACCTTGCCCGTCAACATCACTTTTCAGGTCGGCTCGGTTATCACCGTTCGGGACGGCCAGCAGGTAAGCGTGGGCGAGGTGCTGGCGCGTATTCCGCAAGAGAGTTCAAAAACCAGGGATATTACGGGGGGGTTGCCGCGGGTTGCGGAATTGTTTGAGGCGCGATCGCCCAAAGATGCCGGAGTCTTGGCGGAGGTGACCGGAATTGTATCTTTTGGTAAGGATACCAAGGGCAAGCAGCGGCTGGTCATTACCGATCTGGACGGGATTTCTCATGAATATCTGATCCCCAAAGACAAACATGTCACTGCACATGACGGCCAGGTGGTGAACAAGGGTGAAAGTATCGTCGATGGGCCAGCCGATCCCCACGACATTTTACGGCTGCTAGGCGTAGAGGCCTTGGCCCGCTACATCACCGACGAGGTCCAGGATGTTTATCGCCTGCAGGGTGTCAAGATCAATGACAAGCACATCGAGGTGATCGTGCGCCAGATGTTGCGCCGTGTGCAGATCACGGATGCCGGAGACACGCGTTTCATACCTGGCGAGCAGGTGGAGCGTGCAGACATGCTGGCGGAAAATGAGGCGGTAATGGCCGAGGACAAGAAACTCGCGCAATATGAGTTCATGCTGCTGGGTATTACCAAGGCTTCCCTATCCACGGATTCGTTCATTTCGGCCGCTTCCTTCCAGGAGACTACACGCGTGCTGACGGAAGCAGCCATCATGGGCAAGAAGGATGATCTGCGTGGCCTGAAGGAAAATGTGATCGTCGGGCGACTCATTCCCGCGGGTACCGGTCTTACCTTCCATAACACGCGCAAGAAGCAGAGGTTGCTGCTGGATGCGGGGGAAAGTCTGGATCTGGGCGAAATCGAGACCGAAGAAATGCGCGACAGCGGATATACGGTCTAG
PROTEIN sequence
Length: 1410
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLNRCQLLTDDDYRAKTEEYGDDFRASMGAEGIRDLLANLNIRVEIDNLRREMGTTGSETKMKKISKRLKVLEAFNKSGIKPEWMVLAVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEIMGIASTIKAAKREVENESPVVWDILEDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMMSTNNVLSPANGEPIIVPSQDIVLGLYYTTREKVNARGEGMIFSNIGEVSRAYESRIIELNARITVRIKEYEIDRDGERSEKTTRYETTVGRALLSEILPTGLPFPLINKVLKKKEISKLINASFRRCGLRETVIFADKLMYSGFSYATRAGISICLDDMLTPAQKDAIINASEKEVQEIEVQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQLGVEPIVDPATREVKTDNKGEPLTQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTQEDCGTSNGVVMKALVEGGEVIEALRERILGRVVANDIVNPEHQAVIYPAGILLDENAVDTIESLGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTAVASQVESKSNGVVHYSPTMRYVTNARNELVAISRSGEVVIHDDNGRERERHKAPYGATLLIRDGEVVRAGQVLAAWDPHTRPIITEYAGKVRFENVEEGVTVAKQIDEVTGLSTLVVIDPKRRGVAQTKGLRPMVKLLDEDDKEVRLAGGTLPVNITFQVGSVITVRDGQQVSVGEVLARIPQESSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGIVSFGKDTKGKQRLVITDLDGISHEYLIPKDKHVTAHDGQVVNKGESIVDGPADPHDILRLLGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVQITDAGDTRFIPGEQVERADMLAENEAVMAEDKKLAQYEFMLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDDLRGLKENVIVGRLIPAGTGLTFHNTRKKQRLLLDAGESLDLGEIETEEMRDSGYTV*