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SCNpilot_cont_500_bf_scaffold_3123_18

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 49 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 22895..23428

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 177.0
  • Bit_score: 299
  • Evalue 2.50e-78
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 290
  • Evalue 3.40e-76
Peptide deformylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNN3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 177.0
  • Bit_score: 299
  • Evalue 1.80e-78

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCGATTAAGCCCGTGTTGAGGATGGGTGATTCCCGGCTGCTGGACGTGTCTCGAGAGGTGGCGGAATTTGGCACGTCGGAGCTGAAGGCGCTGGTGCAGGACATGCATGATACGATGGCAGCCCTGGATGGCGCTGGACTCGCTGCTCCCCAGATCGGCGTCAGCCTTCAAGTCGTCATATTCGGCGTGAAACGCAATCCGCGTTATCCGGATGCCGAAGAGGTACCCTATACCGTCCTGGTAAATCCTGTGATTACGCCGCTGACGCAGGAAATGGAATCGGGATGGGAAGGTTGCCTCAGTGTTCCGGGGTTGCGAGGCGTGGTGCCGCGTTACAGCAGAGTTCGATATACCGGCAAGGACCAGCATGGGGAAACGATAGATCGCAGCGTCGAGGGTTTCCACGCTCGCGTGGTGCAGCATGAATGCGATCATCTGCTCGGTATTTTATATCCGATGAGGATGACCGACTTTCGCACCTTCGGCTTTACCGATGTCCTGTTCCCGGATGGCGCGCCAATGGACGAGTAG
PROTEIN sequence
Length: 178
MSIKPVLRMGDSRLLDVSREVAEFGTSELKALVQDMHDTMAALDGAGLAAPQIGVSLQVVIFGVKRNPRYPDAEEVPYTVLVNPVITPLTQEMESGWEGCLSVPGLRGVVPRYSRVRYTGKDQHGETIDRSVEGFHARVVQHECDHLLGILYPMRMTDFRTFGFTDVLFPDGAPMDE*