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SCNpilot_cont_500_bf_scaffold_1241_5

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(3970..5298)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVW2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 443.0
  • Bit_score: 661
  • Evalue 7.70e-187
  • rbh
Variovorax paradoxus strain MEDvA23 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26005.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 439.0
  • Bit_score: 666
  • Evalue 2.60e-188
ABC transporter periplasmic protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 443.0
  • Bit_score: 661
  • Evalue 2.40e-187
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGACCACGACACGGAAGGCATTTCTCGGAGGCCTGCTGGCCGCGGGCCTGGCCGCCGCAGGCCTGGCGCCGGCGGCCGCGCAGCAGCGCACGGAGATCCAGTTCTGGCACGCCATGGGCGGCGTGCTGGGCGAGCGGGTCGACGAGATGGTGAAGAAGTTCAACGACTCGCAGTCCAAGTACACGGTCGTGGCCACCAACAAGGGCAACTACGACGAGGTGATCAACGGCGTGATCGCCGCTTACCGCGCCAAGAAGCAGCCGCACCTGGTGCAGATCTACGAGCGCGGCTTCATGACCATGCTGATGTCGGACGCCATCGTGCCCGTCCAGGACCTGATGACCGAGAAGGGTTACAAGATCGACTGGGCCGACTTCATCAAGCCGGTCGCCGGCTACTACATGTACAAGGGCAAGCTGATGAGCATGCCCTTCAACTCCTCGACACCGATCCTCTGGTTCAACAAGGAGCATTTCGAGAAGGCGGGCTACAAGGCACCGGCCGAGACCTGGCAGGAGCTCGAAAAGCAGCTCTACGACATCAAGGCCAAGGGCATCAGCGAATGCGGCTCTTCGCTGGCCGGCGACTATTTCTGGAGCCTGGTCGAGAATTACAGCACCGTGAACGACCAGCCCTTCGGTACCAGGTCGAACGGCTTCGACGGGCTCGATACCGAGTTCGTCTATAACAAGACCACGGTCGTGCCGCAGGTCACCCGCATCAAGAAGTGGGTCGACGACGGGGTGATGCAGATCGCCGGCCAGGGGCTCAGTCCCGAGCAGCTCTATACCTCGGGCAAGTGTTCGACCTTCTTCGCCTCGACCGCCGCGCACAGCAGCGTCGAGCGCAACGCCAAGATTCCCTGGAGCGCCACCTACCTGCCGCACGAGCAAGGACTGACGCCGCGCAACAGCACGATCGGAGGCGCCACCCTCTGGGTGCTGAAGGGCCACAAGCCGCAGGAGTATGACGGCGTCGCCGCCTTCCTCGACTTCATCGCCAGCGCCGAGCTGCAGGTCTGGTGGCACAAGGTGACGGGCTACGTGCCGCTCACCAACAAGGCCTACCAGGTCGCCAAGCAGAGCGGCTACTACACCGAGAACCCGACGCGCGAGATCGCGGTGCTGCAGCTCAACCGCGGCACGCCGACGGCCAACTCGCAGGGCTTCCGCTTCGGCAACTTCACGCAGACGACTTTCGCGCTGCGCCAGGAACTCGAAGCCATCTTCGCCAACAAGAAGGCGCCGCAGCAGGGGCTCGACGACGCGGTGCGTCGCGGCAACGAGATCCTGCGGCAGTTCGAGAAGCTGAATGCCGGCAAGTATTGA
PROTEIN sequence
Length: 443
MTTTRKAFLGGLLAAGLAAAGLAPAAAQQRTEIQFWHAMGGVLGERVDEMVKKFNDSQSKYTVVATNKGNYDEVINGVIAAYRAKKQPHLVQIYERGFMTMLMSDAIVPVQDLMTEKGYKIDWADFIKPVAGYYMYKGKLMSMPFNSSTPILWFNKEHFEKAGYKAPAETWQELEKQLYDIKAKGISECGSSLAGDYFWSLVENYSTVNDQPFGTRSNGFDGLDTEFVYNKTTVVPQVTRIKKWVDDGVMQIAGQGLSPEQLYTSGKCSTFFASTAAHSSVERNAKIPWSATYLPHEQGLTPRNSTIGGATLWVLKGHKPQEYDGVAAFLDFIASAELQVWWHKVTGYVPLTNKAYQVAKQSGYYTENPTREIAVLQLNRGTPTANSQGFRFGNFTQTTFALRQELEAIFANKKAPQQGLDDAVRRGNEILRQFEKLNAGKY*