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SCNpilot_cont_500_bf_scaffold_1709_28

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 26607..27230

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 200.0
  • Bit_score: 290
  • Evalue 2.30e-75
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 200.0
  • Bit_score: 287
  • Evalue 4.40e-75
isopropylmalate isomerase n=1 Tax=Methylocystis parvus RepID=UPI0002E78030 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 200.0
  • Bit_score: 289
  • Evalue 2.20e-75

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Taxonomy

Lyngbya confervoides → Lyngbya → Oscillatoriales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGAAAAGTTCACCAGCCTCACGGGCGTCGCCGCGCCGCTGCCGATGGTCAATATCGACACCGACATGGTGATCCCGAAGGACTACCTGAAGACGACGGCGCGCACCGGACTGGGGCGCCATCTCTTCGCCGAGATGCGCTACCGCGAGGACGGCAGCGAACGCGCCGAATTCGTCCTCAACCGGCCGGCCTATCGGCAGGCCAGCATCCTGATCGCTTTCGAGAATTTCGGCTGCGGGTCGAGTCGCGAGCACGCACCGTGGGCGTTGCGCGACTTCGGCATCCGCTGCGTCATCGCGCCGTCCTTCGCCGACATCTTCTTCAACAACTGCTTCAAGAACGGCATCCTGCCGCTCGTTCTGCCGAAAGCGATCTGCGAGCAGCTCGTCGACGAGGCGGAGCGCGGCGCCAACGCCACCTTGACCATCGATCTCGAGGCACAGGAGCTCGTTCGCTCCGATGGCGGGCGCATCGCCTTCGAGGTCGAACCGTTTCGCCGGCAGCGACTCCTGCAGGGGCTCGACGAGGTTGGAGCGACAATGGCCAAAGCAGGGGGCATCGACGCTTTCGAAAGCCGGCTGGCGAAACAGCAATTCTGGAGGATGGATGCGCTGGGCCAGTGA
PROTEIN sequence
Length: 208
MEKFTSLTGVAAPLPMVNIDTDMVIPKDYLKTTARTGLGRHLFAEMRYREDGSERAEFVLNRPAYRQASILIAFENFGCGSSREHAPWALRDFGIRCVIAPSFADIFFNNCFKNGILPLVLPKAICEQLVDEAERGANATLTIDLEAQELVRSDGGRIAFEVEPFRRQRLLQGLDEVGATMAKAGGIDAFESRLAKQQFWRMDALGQ*