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SCNpilot_cont_500_bf_scaffold_1976_2

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(164..1066)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035EC445 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 299.0
  • Bit_score: 388
  • Evalue 5.00e-105
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB53965.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 299.0
  • Bit_score: 381
  • Evalue 1.10e-102
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 296.0
  • Bit_score: 379
  • Evalue 7.30e-103

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGGAAGACCTCAACGACCTCTACTACTTCGCCCAGGTGGTCGAGCATGCCGGCTTCGCCCCGGCGGCCCGGGCGCTGGGGATGCAGAAGTCGAAGCTCAGTCGCCGCATCGGCCTGCTCGAGGATCGCCTGGGCGTCCGGCTGGTCCAGCGCTCCAGCCGCAGCTTTTCCGTCACGGAGCTCGGCCAGGAATATTACCGCCAGTGCCGGGCCATGCTGATCGAAGCCGAGGCGGCGCAGGCGGTGATCGACCAGGTGCAATCCGAGCCGCAGGGCGTGGTCCGCATGAGCTGCCCGCCGGCGTTGCTCGACTATCAGTTCGGTGAGCTGATCGCCCATTTCATGGCCGCCCATCCCAAGGTGCGGGTCCATCTCAAGGCGCTGAACCGCAAGGTCGACGTGATCGCCGAGGGCTACGATCTCGCGGTTCGTGTCGGCGTCGAAGCGACGGAACAGGCCGATCTGGTGATGCGCAAGCTCGGTGAAACGGAGCAGAGGCTGATCGGCAGCCCGGCCTTCCTGAAGAATTGTCCGCCGGTCGAGGTGCCGACCGATCTCGGCACCCTTCCCAGTCTCGATTTCGGCCTGCCGCAGAACGCGCATGTCTGGCGCCTTCACCATGCCGACGGGCGCACCGCAGAGGTCCATCATCAGCCCCGTCTCGTCACCGACGACCTCGCCGCCTTGCGGGCCGCGGCGCTCAGCGGCGTCGGCGTGGCGCAGGTGCCGACACTGATGGTCGAGAGCGACATCGCCGCCGGCCATCTGATCGACGTGCTGCCGCAGTGGCGGCCGCGCAACGAGATCGTCTATGCCGTCTTTCCGTCGCGGCGCGGCCTGCTGCCGTCGATCCGCGCGCTGCTCGAGTTCCTGTCCGACGAATGCCGGCCGCACCGGCCGTAG
PROTEIN sequence
Length: 301
MEDLNDLYYFAQVVEHAGFAPAARALGMQKSKLSRRIGLLEDRLGVRLVQRSSRSFSVTELGQEYYRQCRAMLIEAEAAQAVIDQVQSEPQGVVRMSCPPALLDYQFGELIAHFMAAHPKVRVHLKALNRKVDVIAEGYDLAVRVGVEATEQADLVMRKLGETEQRLIGSPAFLKNCPPVEVPTDLGTLPSLDFGLPQNAHVWRLHHADGRTAEVHHQPRLVTDDLAALRAAALSGVGVAQVPTLMVESDIAAGHLIDVLPQWRPRNEIVYAVFPSRRGLLPSIRALLEFLSDECRPHRP*