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SCNpilot_cont_500_bf_scaffold_1976_21

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 20407..21009

Top 3 Functional Annotations

Value Algorithm Source
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 194.0
  • Bit_score: 205
  • Evalue 2.10e-50
3-isopropylmalate dehydratase small subunit id=2642972 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 201.0
  • Bit_score: 227
  • Evalue 1.30e-56
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 201.0
  • Bit_score: 227
  • Evalue 1.80e-56

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGAACCCTTCACCACGCTCGAAGCGGTGGCGATCCCGATCGACCAGCCGAACCTCGACACCGACCAGATCATTCCGGCCCGCTTCCTGGGCAAGCCCCGCGACAGTCAGGTCAAGGCCGTGTTCCACGACCTGCGCTACGCGCCGGACGGCACGCCGCGTCCGGAATTCGTGATGAACCAGAAGGGCTTCGCCGGCGCCAGGATCGTGGTGGCGGAGCGCAACTTCGCCTGCGGCTCGTCGCGCGAGAACGCCGTCACGGTGATGGTCGACAATGGACTGCGCGCCTTCATCGCGCCGAGCTTCGGCGACATCTTCTTCAACAACTGCTTCCAGAATGCCGCCTTGCCGGTCCGGCTGGAGGCGGGGCGCGTGGCCGAAATCCGGGCGGCCCTGCATGCCGCACCCGGCGCAAGGATCAGGATCGACCTCGCCAGCCAGACCGTGGTCGGTCCCGACGGCAGGACCGATCGCTTCGAAATCGATTCCTTCCGCAAGGACTGCCTGCTGAAGGGCGTCGACGAGGTGAACCTGACTCTGGGCTATGAGGCGGAGATCGCTGCTTTCGAGACGAAACAGCGCGGCGAGATGAGCTGGCTGTAG
PROTEIN sequence
Length: 201
MEPFTTLEAVAIPIDQPNLDTDQIIPARFLGKPRDSQVKAVFHDLRYAPDGTPRPEFVMNQKGFAGARIVVAERNFACGSSRENAVTVMVDNGLRAFIAPSFGDIFFNNCFQNAALPVRLEAGRVAEIRAALHAAPGARIRIDLASQTVVGPDGRTDRFEIDSFRKDCLLKGVDEVNLTLGYEAEIAAFETKQRGEMSWL*