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SCNpilot_cont_500_bf_scaffold_2116_20

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(17092..17397)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5K0_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 103.0
  • Bit_score: 148
  • Evalue 2.90e-33
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 102.0
  • Bit_score: 152
  • Evalue 3.70e-34
ihfA; integration host factor alpha-subunit (IHF-alpha); K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 103.0
  • Bit_score: 148
  • Evalue 9.30e-34

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGAAGGCCGGACGATCACGCGAGCCGATCTCAGCGAGTCAGTGTTCCAGGAAGTGGGACTGTCTCGTAATGAGTCCAGCGACCTTGTGGAGACGATCCTCTCCGAGGTGGTGGAGGCTTTGGCACGTGGCGAGTCGGTAAAGATCTCCTCGTTCGGGAGCTTTACGGTTCGCGACAAAGGTCAGCGCGTAGGCCGCAATCCGAAAACCGGACAGGAAGTTCCGATCCTGCCACGGCGCGTACTCGTCTTTCGAGCGTCGAATGTCCTGAAATCTCTGATCAACGGGGCACCCGATGAGGACTAA
PROTEIN sequence
Length: 102
MEGRTITRADLSESVFQEVGLSRNESSDLVETILSEVVEALARGESVKISSFGSFTVRDKGQRVGRNPKTGQEVPILPRRVLVFRASNVLKSLINGAPDED*