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SCNpilot_cont_500_bf_scaffold_2633_12

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(9319..10185)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DE84F similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 289.0
  • Bit_score: 296
  • Evalue 3.20e-77
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KCB45616.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 287.0
  • Bit_score: 210
  • Evalue 3.30e-51
leucine/isoleucine/valine ABC transporter; permease component (LivH-like); K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 286.0
  • Bit_score: 208
  • Evalue 3.60e-51

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGATATCGTCTTCCAGCAGATCGCCAACGGGCTCTCCGTCGGCATGGGCTATGCCCTGGTGGCGCTCGGCCTGTCGCTGATCTTCGGCGTCCTGCACGTCATCAACTTCGCCCATGGCGAGACCTTCATGATCGGAGGCCTCGTCACTTTGATCGCGACCTCGCTGCTCGGCGTGCCCTATCTGCTGGCCCTGCCGATCGCCGGCGTCGCCGGCGCCCTGCTGGGCTTCGCCATCAACCACCTTGCCGTCCAGCCGCTGCTGCAGCGTCGCGACGGCGGTGCCGACGTCCTGCTGGCCACCTTTGCGGTCAGCATCCTCATCCATCAGGCCGTGGTGGTGCTGTGGGGGCCGGCGCCGGCCCGTATCGACGGGCTGGCCGGCACGATCGAGATCGGCTCCGTGGTGCTGACCAGCCAGCGCCTGTTCGTGCTCGCCGTCGGCATCGCCTTCCTGGTGGCGCTGGAATGGTGCCTGAAGCGCACGCGCTTCGGCACCGAGCTGCGCGCCGTGGCACAAAGCCAGTTCGCCGCGCGCGTGGTCGGCATCGAAGTCGATCGCGTCAACCTCAGGACCTTCGTCATCGCCGCCGTCATTGCCGGCGTCGGCGGTGGCCTGCTGTCGCCGGTCATCCTCTATTCGTCGCTGATGGGCCAGGTCGTGATCATCAAGGCCTTCGTCGTGGTGGTGATCGGCGGCATGGGCAGCATCGTGGGCGCCGTGGTCTGCGGCCTCCTGGTCGGGCTGCTCGAATCGATGCTGAGCCTGGTGACCAGCGAAGGAACGGCCACCGCCATCATCTACTCCCTGCTGCTGGCCGTGCTGCTGGTGCGGCCTTACGGCCTCGCCGGAAAGAAGGCCCGATGA
PROTEIN sequence
Length: 289
MDIVFQQIANGLSVGMGYALVALGLSLIFGVLHVINFAHGETFMIGGLVTLIATSLLGVPYLLALPIAGVAGALLGFAINHLAVQPLLQRRDGGADVLLATFAVSILIHQAVVVLWGPAPARIDGLAGTIEIGSVVLTSQRLFVLAVGIAFLVALEWCLKRTRFGTELRAVAQSQFAARVVGIEVDRVNLRTFVIAAVIAGVGGGLLSPVILYSSLMGQVVIIKAFVVVVIGGMGSIVGAVVCGLLVGLLESMLSLVTSEGTATAIIYSLLLAVLLVRPYGLAGKKAR*