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SCNpilot_cont_500_bf_scaffold_21339_5

Organism: SCNPILOT_CONT_500_P_Delftia_66_8_1

partial RP 34 / 55 MC: 1 BSCG 33 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3633..4460

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion system inner membrane R protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 232.0
  • Bit_score: 270
  • Evalue 1.80e-69
Bacterial export s, 1 family protein {ECO:0000313|EMBL:KFJ11384.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 239.0
  • Bit_score: 450
  • Evalue 1.40e-123
type III secretion system inner membrane R protein; K02421 flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 232.0
  • Bit_score: 270
  • Evalue 5.70e-70

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGATTCCCTGCCGCATCACTGGCTGCCGGCGATCGATGGCACCTGGCTTCACGACGCGTGGTTAAAAGCTTTTCTTCCCTCGTTGCGGTTGGCTGTCGTGCTGGCAATGACGCCCGTGCTGTATGCCATGCCCATTCCCGGGCGCGTGCGTGCGCTGCTGGTGATCGGCCTGTCCTGCACGATGGGGCAATTGCTGTCGTTGCCACCGGCAGCGGCCGTACTGAGCATGGGTGGATTGCTCCAGGCGGCATGCGTGGAGGTGGCGCTGGGCATTGTGCTGGCGTTGGGCGTGCTGCTGGCATTCGCAGCCTTTTCCCTGGCGGGCAATCTTCTCGATGTGCAGATCGGGTTTGGCATTGCGCAAGTGTTCGATCCCGTGGGTAACAAGGCCGCGCCGCTGCTGGTGTCGGTATTCAACTATGTGGCCGTGGTCGGTTTCGTGCTGATCGATGGCCATCACAGCCTGCTGCGGGCCCTCGCCTACAGCTTCGAGCTGTTTCCGGCCGGTGCGAACTGGCCATTGGTTCTCGCCTCGGGCCCCGTCTTCAAGCAGGCCAGCGGGATGTTCATTCTTGGATTTGCGCTGGCCGCCCCTGTGGTGTTCTGTATTTTGCTTGTGGAGTTCGCCTTGGGCCTGGTCGCCAGAAATCTTCCTCAGATCAATATGCTGGTGCTGGGCATTCCCGCCAAGATCGTTGTCGGTTTTGCCGTGATGTCGCTGTGGTTTGCCGGAATGGGTGGCGCCATGAACCGGGTGTACATGGGCATCTTCGATATGTGGGGAGCCGTCTTTCTCGGCGCGACCCATGGGGCGGGGGCTCACTGA
PROTEIN sequence
Length: 276
MDSLPHHWLPAIDGTWLHDAWLKAFLPSLRLAVVLAMTPVLYAMPIPGRVRALLVIGLSCTMGQLLSLPPAAAVLSMGGLLQAACVEVALGIVLALGVLLAFAAFSLAGNLLDVQIGFGIAQVFDPVGNKAAPLLVSVFNYVAVVGFVLIDGHHSLLRALAYSFELFPAGANWPLVLASGPVFKQASGMFILGFALAAPVVFCILLVEFALGLVARNLPQINMLVLGIPAKIVVGFAVMSLWFAGMGGAMNRVYMGIFDMWGAVFLGATHGAGAH*