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SCNpilot_cont_500_bf_scaffold_1619_19

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(19922..21370)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Spirosoma panaciterrae RepID=UPI00035E5307 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 482.0
  • Bit_score: 928
  • Evalue 2.10e-267
  • rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:AKD54595.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 482.0
  • Bit_score: 869
  • Evalue 2.20e-249
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 483.0
  • Bit_score: 860
  • Evalue 2.90e-247
  • rbh

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1449
ATGCAGAAGTTAAGCCTATCCCAATCACTTCAGCAAAAGCTATCTCCGCAGCAGATACAATTTATCAAGCTGCTGCAGATACCAACCGCTGAATTAGACACCAGAATTGAAGAAGAACTGGAAATTAATCCAGCCCTGGAAGAGGGTATGGATGAAGAATATGAGCAAAAAGAGGAAGACGATCCGTACGATGAGGTAGACGAATACAAAGACCGTGACGACGATCTGGATATCGATAGTTACATTAAAGACGAAGACTATACGGGCTACAAAATGCAGGGCGACGGTAACTATGCCGAAGAAGAACGCGAAATGCCGCTAGCCACCAGCTCTAGCCTGACCGATGCACTACTCCAGCAATTTGGCTACCTCAACCTGACCGAACAACAGCGAATTGTTGGTCTTCAGCTCATTGGCAGTATCGAAGCCGATGGATATATCCGTCGATCATTGCAGGCAATTGTCAACGATCTGGCCTTTGGGCAGAACGTATTTACCTCTACCGAAGAGGTCGAAGCTATTCTGCATAAAATTCAGTCATTCAATCCCCCTGGCATTGGCGCCCGTACCTTACAGGAGTGCCTGATCCTGCAACTTCGCCGGAAAGACCCGGCCGATCCGTACAACGTACTGGCCATCCGTATCATCGAGGATTTCCTCGATGAATTCTCCAAAAAGCATTACGACAAAATCCAGCGACGACTTAATATTAGCGATGATTCGCTCAAAAAAGTCATTGATATCATCATCAAGCTTAACCCCAAGCCCGGCTCAGTCGAAGATGAAGCCGGAGCCGCCCAGTACCTGGTCCCTGACTTTATTCTGACCAATAACAACGGAAAGCTCGAACTGACGCTGAATTCTAAAAACGCCCCTGAGCTACGGATCAGCCGATCGTTTGCTGATATGCTTGATACCTACGACAAGAGCAAAAAACAGAACAAATCCCTCAAAGAAACGGTCACGTTCGTAAAGCAGAAGCTGGATGCAGCCAAATGGTTTATCGACGCCATCAAACAGCGCCAGCAAACCCTGCTCAAAACGATGAATGCTATTGTTCGTTTCCAGTACGACTTTTTCCTGACAGGCGACGAATCGCGGCTTAAACCCATGATCCTGAAAGATATTGCGACGCTGATCGACATGGACGTTTCGACCGTTTCGCGGGTTGCCAATAGCAAAGCCGTACAGACTGAGTTCGGGATTTATCCACTCAAATATTTCTTCTCAGAAGGTATTTCGACCGATACGGGCGAGGACGTCAGTAGCCGGGAAGTAAAGAATATTTTAAAAGACCTGATCGATGCCGAACCTAAGCTTCATCCCTTATCGGACGATAAACTGGAAAAGATACTCAATGACCGGGGCTACAACATAGCCCGGCGTACCGTTGCCAAATACCGCGAGCAACTCAATATTCCGGTCGCCCGGTTACGAAAACAGCTATAA
PROTEIN sequence
Length: 483
MQKLSLSQSLQQKLSPQQIQFIKLLQIPTAELDTRIEEELEINPALEEGMDEEYEQKEEDDPYDEVDEYKDRDDDLDIDSYIKDEDYTGYKMQGDGNYAEEEREMPLATSSSLTDALLQQFGYLNLTEQQRIVGLQLIGSIEADGYIRRSLQAIVNDLAFGQNVFTSTEEVEAILHKIQSFNPPGIGARTLQECLILQLRRKDPADPYNVLAIRIIEDFLDEFSKKHYDKIQRRLNISDDSLKKVIDIIIKLNPKPGSVEDEAGAAQYLVPDFILTNNNGKLELTLNSKNAPELRISRSFADMLDTYDKSKKQNKSLKETVTFVKQKLDAAKWFIDAIKQRQQTLLKTMNAIVRFQYDFFLTGDESRLKPMILKDIATLIDMDVSTVSRVANSKAVQTEFGIYPLKYFFSEGISTDTGEDVSSREVKNILKDLIDAEPKLHPLSDDKLEKILNDRGYNIARRTVAKYREQLNIPVARLRKQL*