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SCNpilot_cont_500_bf_scaffold_2294_11

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(8652..9359)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Spirosoma panaciterrae RepID=UPI000380CEC6 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 235.0
  • Bit_score: 466
  • Evalue 1.90e-128
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 246.0
  • Bit_score: 423
  • Evalue 4.50e-116
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB41512.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 246.0
  • Bit_score: 423
  • Evalue 2.00e-115

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGCGACTATTCCCGAAGTTATGTCAGATACGCCAACCAGCGACCGGAACCGCATCGGCGGACCGACCGGACCGGATCAATTTTTACCCGACAGCGATTCTGCCGAACAGCCACTGGCTAACGCGCCTTCTCGTGGTTATTCTGAGGAGCAGAAGTACCAGATTTTTAATAAGGAGTTTATGCCCCATATCGACTCCATGTACAACTTCGCGTTCCGTCTGACAATGGATGAGGACGATGCGAATGATCTGGTGCAAGATACTTATCTGAAAGCGTTTCGGTTTATTTCCTCGTTTGAGCAAGGAACTAACGCTAAAGCATGGCTGTTTCGGATTCTGAAGAACAGTTTCATCAACGATTATCGGAAAAAAAGTAAGGAGCCGGCTAAGGTAGATTATCAGGACGTTGAGACGACTTATAACTCTGAAGATGCCGAATCTGAACACACGGTTGACCTGCGGGCCGAGTCCGTTTCTGACTTAATTGGTGATGAAGTTGCAACCGCCCTGAACTCGTTGCCGGTTGATTTCCGAACGGTCATTATTCTTTGTGATATCGAAGGATTCACATATGAAGAAATGGCTAAGATTCTGGATATTCCAATTGGCACTGTTCGGTCTCGTTTGCACCGTGCTCGTAATCTATTGAAGGAAAAATTACGTGATTATGCTTCTTCAATGGGATATAAGGAAGAAAATGACGAATAA
PROTEIN sequence
Length: 236
MATIPEVMSDTPTSDRNRIGGPTGPDQFLPDSDSAEQPLANAPSRGYSEEQKYQIFNKEFMPHIDSMYNFAFRLTMDEDDANDLVQDTYLKAFRFISSFEQGTNAKAWLFRILKNSFINDYRKKSKEPAKVDYQDVETTYNSEDAESEHTVDLRAESVSDLIGDEVATALNSLPVDFRTVIILCDIEGFTYEEMAKILDIPIGTVRSRLHRARNLLKEKLRDYASSMGYKEENDE*