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SCNpilot_cont_500_bf_scaffold_2894_10

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 8545..9123

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 191.0
  • Bit_score: 313
  • Evalue 5.40e-83
  • rbh
pseudouridine synthase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036210C1 similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 192.0
  • Bit_score: 349
  • Evalue 1.60e-93
  • rbh
Pseudouridine synthase {ECO:0000313|EMBL:AKD54541.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 192.0
  • Bit_score: 332
  • Evalue 2.90e-88

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGTATTACCTCATTTACAAGCCTTATCTCATGCTCTCGCAGTTTTCGCGGGAGGGTGACAAGCCGACGCTGGCTGATCTGGATTTTGACTTTCCAAAAGATGTGTACCCGGTTGGGAGACTCGATGCGGATAGCGAGGGTTTACTGCTGCTGACCAGCGACAAGCAATTGAATCATAGGCTGCTGAATCCCAAGTTTCGCCATCATCGCACCTATTATGTGCAGGTAGAGGGGGCATTGACCCAACAGGCCTCTTCGCAACTGGCGAAAGGTGTGACGATCTCAGTCGATGGGAAACCGTATCATACTTTACCAGCCACTGCTCAGATTATTCCTGAACCGGCGCTGCCCGAACGAAATCCACCTATTCGCTATCGGGTAAGCATCCCTACATCCTGGCTATCTATTTCTCTGCATGAAGGTAAAAATCGGCAGGTTCGAAAAATGACCGCATCGGTAGGCTTTCCAACGCTTCGACTGGCACGCTGGGCTATAGAAAGCCTTACCGCCGATGGTATGAAATCCGGTGATGTGCGTGAGTTGAGCCGAGTGGAGGTGATGCAGGGATTGAACTTGTAG
PROTEIN sequence
Length: 193
MYYLIYKPYLMLSQFSREGDKPTLADLDFDFPKDVYPVGRLDADSEGLLLLTSDKQLNHRLLNPKFRHHRTYYVQVEGALTQQASSQLAKGVTISVDGKPYHTLPATAQIIPEPALPERNPPIRYRVSIPTSWLSISLHEGKNRQVRKMTASVGFPTLRLARWAIESLTADGMKSGDVRELSRVEVMQGLNL*