ggKbase home page

SCNpilot_cont_500_bf_scaffold_5870_20

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(16397..17176)

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 257.0
  • Bit_score: 424
  • Evalue 2.20e-116
  • rbh
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 257.0
  • Bit_score: 424
  • Evalue 9.90e-116
diaminopimelate epimerase n=1 Tax=Spirosoma panaciterrae RepID=UPI000376A1E5 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 259.0
  • Bit_score: 463
  • Evalue 1.10e-127
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 780
ATGACCTTCGACTTTTATAAATACCAGGGCACCGGAAACGATTTTGTGATGATCGATGACCGGAACCAAACCTTCCCGGCTTCCGATCAGGCTCTAGTAGAGCGCATTTGTCATCGGCGGTTTGGCGTTGGAGCAGATGGACTCATTCTGCTTCAGAATGACCCTGCGTATGATTTTCGGATGGTTTATTTCAATGCTGATGGGGCCGAAGGTAGCATGTGCGGCAATGGGGGGCGATGTATCGTTCGGTTTGCGCATGATCTTGGTCTGTTTGAGAAGGAAACCCGCTTTCTGGCAGTCGATGGCGAACACACGGCTGTCGTAAGCGAAGCGGAGATCTTTTTGAAAATGAGTAATGTGTCGGGCATAGAGAATCGGGGTGGCTTAACGTTCCTGAATACGGGCTCTCCACATGTCGTTCAGTTTGTTGATGATCTGGAATCGCTGGATGTTGTGGCAGAAGGGCGTGCTATTCGGTACGACACTCGTTTTCAGCCCGGTGGAACGAACGTTAATTTCGCACAGGTAATTGATGAACACACACTGTATGTCAGAACCTACGAGCGGGGTGTAGAGGACGAAACCTACTCTTGTGGGACTGGTGTGACAGCTGTAGCCTTAGTGGCGCATCACCTGCTAGGGCGAACCAACCCCATATCGATCCGAACGATGGGGGGAAACCTCCGGGTTTCGTTCGATCCTACGGGTAAGGAACAGTTTGAGAATATCCATCTCATTGGGCCCGCCAAACGGGTATTTACTGGTCTGATAACTGTTTAG
PROTEIN sequence
Length: 260
MTFDFYKYQGTGNDFVMIDDRNQTFPASDQALVERICHRRFGVGADGLILLQNDPAYDFRMVYFNADGAEGSMCGNGGRCIVRFAHDLGLFEKETRFLAVDGEHTAVVSEAEIFLKMSNVSGIENRGGLTFLNTGSPHVVQFVDDLESLDVVAEGRAIRYDTRFQPGGTNVNFAQVIDEHTLYVRTYERGVEDETYSCGTGVTAVALVAHHLLGRTNPISIRTMGGNLRVSFDPTGKEQFENIHLIGPAKRVFTGLITV*