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SCNpilot_cont_500_bf_scaffold_9161_3

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: comp(2380..3006)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Spirosoma panaciterrae RepID=UPI000373B8D3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 208.0
  • Bit_score: 393
  • Evalue 1.10e-106
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 208.0
  • Bit_score: 336
  • Evalue 8.40e-90
Outer membrane efflux protein {ECO:0000313|EMBL:ADB37343.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 208.0
  • Bit_score: 336
  • Evalue 3.70e-89

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
GTGTTGCTGCGTCAGCCTGCCCAAACGTTCATCCTGCCTTCCGAATTACCGACACTTCAGAGGACTGCTCCGCCCCTGGCAACAGCGTTAGACTCCGCTCAGGCCCATCGGCCGGATATTGCCATTACGCAGGAACAGATCAACAATGCTCAGCGTAGCCTGACTTTGGAAAAAGCGCGTCGCACTCCCGATCTGACAACGGGTTTGCTGTTTGAGAAATACGGGAATGCCTATGTGAATTTTCTGGGCTTTCAGGCGTCGATGGATTTGCCTGTTCACAATCGGAATCAGGGAGCAATCCGGTCGGCCGAAACGAATCTGAAGGCGGTAACGAGTGGTTTAGACAATCAGCAGGTTGTGGTTCAAAGCGATGTCCTGAATGCCTACGACAAGCTGAATACCTATTATGCCCAACTCAACGAACGGCCCGATGGCTACCTGGACCGGATTCGGAATATTTCGGTTGAAGCCACAAAAGCGTATAACGCGCGTATGATTGGTCTGCTCGATTATCTGGATAAAATAAAGACGTACCAACAGGCTCAGCTCAATAACATTGACCTGATGAACAACCTCTTTCAGTCGCAGCAGTTGGTCAATTACGTAACCAATACGAAATTCTTCTAG
PROTEIN sequence
Length: 209
VLLRQPAQTFILPSELPTLQRTAPPLATALDSAQAHRPDIAITQEQINNAQRSLTLEKARRTPDLTTGLLFEKYGNAYVNFLGFQASMDLPVHNRNQGAIRSAETNLKAVTSGLDNQQVVVQSDVLNAYDKLNTYYAQLNERPDGYLDRIRNISVEATKAYNARMIGLLDYLDKIKTYQQAQLNNIDLMNNLFQSQQLVNYVTNTKFF*