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SCNpilot_cont_500_bf_scaffold_9161_18

Organism: SCNPILOT_CONT_300_BF_Cytophagia_47_14

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 11 / 38 MC: 4
Location: 13570..15282

Top 3 Functional Annotations

Value Algorithm Source
GMC family oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036929AC similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 570.0
  • Bit_score: 1107
  • Evalue 0.0
  • rbh
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 573.0
  • Bit_score: 999
  • Evalue 3.70e-289
  • rbh
Choline dehydrogenase {ECO:0000313|EMBL:ADB37076.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 573.0
  • Bit_score: 999
  • Evalue 1.60e-288

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCAAACTTCCTCATCGATAGCCGCAAGGCGCAAACCTACGATGCCATTGTTGTGGGGTCTGGTATCAGTGGCGGCTGGGCGGCCAAAGAACTTACGCAACAGGGTCTTCGAACGTTGCTGCTGGAACGTGGGCGTCCCGTCAATCACGTTACCGATTATCCGACGGCCATGCTGAATCCCTGGCAACTGGAGCATCGGGGGCAGGTGCCACTGGCCATTCGAAACGAGTATTCAATAGCCAGCCGGAATTATGCCTTCCATGAGGATACCATGCACTTTTTTGCCAAAGACAGTGAGCAGCCTTACGTGCAGGAAAAGCCCTACGACTGGATACATGGCTATCAGGTTGGTGGACGTTCGCTAACCTGGGGGCGGCAAACCCAACGCTGGAGCGATTTCGATTTTGAAGGCCCCGCCCGTGATGGTTATGCCGTAGACTGGCCCATTCGGTATGCCGATATAGCGCCCTGGTACAGCCATGTAGAACGATTTGTTGGCATAACCGGCCACAAAGATGGGCTGGCTACCCTGCCCGATGGCGAGTTTTTACCCCCACACGAGATGTCCTGTGTGGAACGTTATTTTAAACAACAGGTATCGGCTCGCCATTCGGACCGGCATGTGATTATCGGCCGGGCTGCCCATATTACAGAGCCGAAGCCTATTCATACACAACAGGGCCGGGCACGTTGCCAGCATCGAACCCTTTGCGAACGGGGCTGTCCATACGGCGGGTATTTTAGCAGTAATGCCTCCACCATACCCTGGGCCATGCGTACCGGCAAACTTACCCTACGCCCCTATTCGGTAGTGCATTCCATCATCTATGATGAGCAAAAACAGCGGGCAACGGGCGTTCGTGTGATCGACACCCAGACGCATCAAATGACGGAATACTACGCCCGGATTATTTTTGCCAACGCGTCGGCGCTCCATACAAACCTGATCCTACTGAATTCCACCTCCCATCGTTTTCCGAATGGGCTGGGCAACGATTCAGGGTTACTGGGAACGCATATGGCTTTTCATAGCTATCGGGGCCGGGTTACGGCCACTTACGATGGCTTGCTGGATTCCACCACCGACGGGCGACGGCCCAACAGCAGCTATATTCCTCGCTTTCGGAACGTTTTTAAGCAGGAAACCGACTTCCTGCGTGGTTATGCTGCTACCTTTTATTCATCTCGAAATCCTGTTGACAATCAGGAAGGTGTCGGTGCGGCTTTAAAACAGAACCTGATCAATCCTGGTCTGGGCGAATGGCAGGTCGGATCGGCCATGATGGCTGAAACCATACCGAAAGCGCATAGTACCGTTCGGCTCGATCCGGCTCTTAAAGATAATTTTGGGATTCCGCAGCTACGCGTATCGGTTGACTATGATGAGAATGACCGGAAGATTCTGAACGATTTCTTTGAGCAGTTTAGCGAAATGTTTACCCAGGCGGGTTTTAAAAACATTCGGACGATTGATACAGGGCGATTACCTGGCAGCGAAAACCATGAGATGGGTGGTGTCCGCATGGGCCGTGATCCTAAAACGTCGCTGCTCAACCGCTGGAATCAACTCCACCACTGTTCAAATGTATTCGTTACCGACGGCGCCTGCATGACTTCTACCAGCACCCAAAATCCGTCGCTGACCTACATGGCCCTTACGGCCCGAGCCGCCAATTACGCAGTCAGGCAGATGAAGAGATCAGCGCTTTAA
PROTEIN sequence
Length: 571
MANFLIDSRKAQTYDAIVVGSGISGGWAAKELTQQGLRTLLLERGRPVNHVTDYPTAMLNPWQLEHRGQVPLAIRNEYSIASRNYAFHEDTMHFFAKDSEQPYVQEKPYDWIHGYQVGGRSLTWGRQTQRWSDFDFEGPARDGYAVDWPIRYADIAPWYSHVERFVGITGHKDGLATLPDGEFLPPHEMSCVERYFKQQVSARHSDRHVIIGRAAHITEPKPIHTQQGRARCQHRTLCERGCPYGGYFSSNASTIPWAMRTGKLTLRPYSVVHSIIYDEQKQRATGVRVIDTQTHQMTEYYARIIFANASALHTNLILLNSTSHRFPNGLGNDSGLLGTHMAFHSYRGRVTATYDGLLDSTTDGRRPNSSYIPRFRNVFKQETDFLRGYAATFYSSRNPVDNQEGVGAALKQNLINPGLGEWQVGSAMMAETIPKAHSTVRLDPALKDNFGIPQLRVSVDYDENDRKILNDFFEQFSEMFTQAGFKNIRTIDTGRLPGSENHEMGGVRMGRDPKTSLLNRWNQLHHCSNVFVTDGACMTSTSTQNPSLTYMALTARAANYAVRQMKRSAL*