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SCNpilot_cont_500_bf_scaffold_2457_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 9696..10532

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 273.0
  • Bit_score: 455
  • Evalue 4.30e-125
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 276.0
  • Bit_score: 449
  • Evalue 6.90e-124
  • rbh
diaminopimelate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F9A9B similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 273.0
  • Bit_score: 469
  • Evalue 2.70e-129
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGCCGCGCCTGCGTTTCACCAAGATGCATGGCGCCGGCAACGATTTCGTGGTGCTGGACCTGCGCGATGGCGCGCCGCCGCCCGACGCCGACCTTGCCGGGCGCCTGGCCGACCGCCACCGTGGCGTCGGCTGCGACCAGATCCTGACCATCGAGCCGCCGCGCACCGCCGGCTCGGTTGCCGCGTACCGGATCTGGAACGCCGACGGCTCCACCTCCCAGCAGTGCGGCAACGGCGCGCGCTGCGTGGGCGCCTGGCTGGTACGCGATGGCGCGGCGCAGGGGGATGAATTCCTGATCGACAGCCCGCTGCGCACGCATGTCGTGCGGCGGCTGGACGCCGGGCATTACGCGGTGGCGATGGGCCGGCCCGAGTTCGAGCCGGCGCGGATTCCGCTGATCGGCTTCCCGCGCGCGCGCGAGGAATACGTGATGCCGCTGCAGGGCGAGAACGTGCGCTTCGGCGCGGTGTCGATGGGCAACCCGCACGCGGTGCTGGAAGTGGGCCTGATCGATGCCGCCCCGGTGGAGCGGATCGGTCCGCTGCTGCAGCAGCATGCATCGTTCCCGCAGTCGGTGAACGTCGGTTTCGCCCAGGTGCTGGGCCCCGGCCACGTGCGCCTGCGGGTGTTCGAGCGCGGCGTCGGCGAGACCCTGGCCTGTGGCAGTGGCGCCTGCGCGGCGGCGGCGGTGCTGATGCAGCGCGGCCGGTTGGCGCGCGATGCGGTGATCTCGCTGCCCGGTGGCGACCTGCGCATCCAGTGGCCGGCCGACGATGCGCAGATCGTGATGTCCGGCCCGGCGGCCTTCGTATTCGATGGAGAGTGGATGGGATGA
PROTEIN sequence
Length: 279
MPRLRFTKMHGAGNDFVVLDLRDGAPPPDADLAGRLADRHRGVGCDQILTIEPPRTAGSVAAYRIWNADGSTSQQCGNGARCVGAWLVRDGAAQGDEFLIDSPLRTHVVRRLDAGHYAVAMGRPEFEPARIPLIGFPRAREEYVMPLQGENVRFGAVSMGNPHAVLEVGLIDAAPVERIGPLLQQHASFPQSVNVGFAQVLGPGHVRLRVFERGVGETLACGSGACAAAAVLMQRGRLARDAVISLPGGDLRIQWPADDAQIVMSGPAAFVFDGEWMG*