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SCNpilot_cont_500_bf_scaffold_3360_5

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(4206..4979)

Top 3 Functional Annotations

Value Algorithm Source
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 254.0
  • Bit_score: 394
  • Evalue 1.10e-106
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 254.0
  • Bit_score: 384
  • Evalue 1.90e-104
  • rbh
3-deoxy-manno-octulosonate cytidylyltransferase n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SUK3_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 252.0
  • Bit_score: 389
  • Evalue 2.50e-105
  • rbh

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAACGTGGTTCCCGAGTTCGTGGTGGCGATCCCGGCGCGATACGCGTCCACCCGCCTGCCGGGCAAGCCGCTGGCCTTGCTGGCCGGGCAGCCGATGGTGGTGCACGTGGCGCGGCGCGCCCTGGCGGCCGGCGCGCGCGAGGTGTGGGTGGCGACCGATGACCGGCGGATCGCCGATGCGCTCGACGGCCTGGACGGCATACGCGTGGCGATGACCCGCGATGACCATGCCTCGGGCACGGACCGGCTGGCCGAATGCGCGCGCCACGCCGGCTGGGATGCGCAGGCCATCGTGGTCAACCTGCAGGGCGACGAGCCGTTCGCGCCGGCGGCGGGCATCCGCGCCGTGGCCGCGACGCTGGCGGCCAGCGGTGCGCCGATGGCGACCCTGGCCACCCCGGTGGAGGACGCCGCGACCCTGTTCGATCCCAATGTGGTCAAGCTGGTGCGGAACGCCCAGGGCGACGCGCTGTACTTCAGCCGCGCGCCGATCCCCTGGCACCGCGATGCCTTCGCCCGTTCCACGGCGCAGCTGCCGCAGGCGCAATGGCTGCGCCATATCGGCATCTACGGCTACCGCGCCGGTTTCCTGCAGCAGTTCGCGGCGATGGCGCCGGGCACGCTGGAGCAGATCGAATCGCTGGAGCAGCTGCGCGTGCTGGAGGCCGGCTTCCGCATCGCCGTTGCGCTGTCGCCCGAGCCGTTCCCGCCGGGCATCGATACCCCGGAAGATCTCGCGCGCGCGGCCGCGCTGCTGGAGACCGTGCGTTGA
PROTEIN sequence
Length: 258
MNVVPEFVVAIPARYASTRLPGKPLALLAGQPMVVHVARRALAAGAREVWVATDDRRIADALDGLDGIRVAMTRDDHASGTDRLAECARHAGWDAQAIVVNLQGDEPFAPAAGIRAVAATLAASGAPMATLATPVEDAATLFDPNVVKLVRNAQGDALYFSRAPIPWHRDAFARSTAQLPQAQWLRHIGIYGYRAGFLQQFAAMAPGTLEQIESLEQLRVLEAGFRIAVALSPEPFPPGIDTPEDLARAAALLETVR*